Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DPA1P20036 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-DPA1P20036 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DPA1P20036 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-DPA1P20036 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DPA1P20036 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DPA1P20036 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DPA1P20036 DBF4P1-201ENST00000412976 1892 ntBASIC3.88□□□□□ -1.79
HLA-DPA1P20036 AC111188.2-201ENST00000529697 1387 ntBASIC3.88□□□□□ -1.79
HLA-DPA1P20036 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DPA1P20036 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DPA1P20036 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DPA1P20036 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HLA-DPA1P20036 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.87□□□□□ -1.79
HLA-DPA1P20036 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DPA1P20036 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DPA1P20036 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.87□□□□□ -1.79
HLA-DPA1P20036 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DPA1P20036 RNU5B-4P-201ENST00000363508 111 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 RNU1-64P-201ENST00000365443 163 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 SNORD82-201ENST00000365530 70 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 SNORA40.4-201ENST00000390971 128 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 RNU6-821P-201ENST00000390995 107 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 AP000567.1-201ENST00000406413 156 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DPA1P20036 AL136133.1-201ENST00000413694 376 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DPA1P20036 Z74696.2-201ENST00000436514 498 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.87□□□□□ -1.79
HLA-DPA1P20036 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.87□□□□□ -1.79
HLA-DPA1P20036 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DPA1P20036 RPL7P52-201ENST00000449200 742 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 OR9M1P-201ENST00000459641 921 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 PABPC1P3-201ENST00000469174 459 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 AC020898.1-201ENST00000474167 787 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 AC084198.1-201ENST00000477747 402 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 AC092902.1-201ENST00000486999 259 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 AC108078.3-201ENST00000502633 489 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.87□□□□□ -1.79
HLA-DPA1P20036 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.87□□□□□ -1.79
HLA-DPA1P20036 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DPA1P20036 USP9YP5-201ENST00000511770 630 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 snoZ278.1-201ENST00000517059 112 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 AC023632.1-201ENST00000518463 375 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DPA1P20036 AC019227.1-201ENST00000526902 510 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.87□□□□□ -1.79
HLA-DPA1P20036 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DPA1P20036 AC044913.1-201ENST00000557200 430 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 AC106785.1-201ENST00000565935 262 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.87□□□□□ -1.79
HLA-DPA1P20036 MIR4666A-201ENST00000580160 79 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DPA1P20036 XIAPP1-201ENST00000603162 600 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 AL137849.1-201ENST00000604767 169 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 AC128687.1-201ENST00000605304 619 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 BNIP3P19-201ENST00000605397 577 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DPA1P20036 AP005137.2-201ENST00000609238 400 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 AC006329.2-201ENST00000611491 394 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.87□□□□□ -1.79
HLA-DPA1P20036 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 AC092184.1-201ENST00000625042 715 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.87□□□□□ -1.79
HLA-DPA1P20036 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.87□□□□□ -1.79
HLA-DPA1P20036 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.87□□□□□ -1.79
HLA-DPA1P20036 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.87□□□□□ -1.79
HLA-DPA1P20036 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DPA1P20036 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.87□□□□□ -1.79
HLA-DPA1P20036 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HLA-DPA1P20036 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DPA1P20036 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 RN7SKP280-201ENST00000364196 304 ntBASIC3.86□□□□□ -1.79
HLA-DPA1P20036 AC234772.1-201ENST00000377927 937 ntBASIC3.86□□□□□ -1.79
HLA-DPA1P20036 RNA5SP129-201ENST00000410276 118 ntBASIC3.86□□□□□ -1.79
HLA-DPA1P20036 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 MTCO3P12-201ENST00000416718 547 ntBASIC3.86□□□□□ -1.79
HLA-DPA1P20036 MTND2P11-201ENST00000423638 648 ntBASIC3.86□□□□□ -1.79
HLA-DPA1P20036 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 AC241584.1-201ENST00000438469 1241 ntBASIC3.86□□□□□ -1.79
HLA-DPA1P20036 SNORA71B-202ENST00000439232 272 ntBASIC3.86□□□□□ -1.79
HLA-DPA1P20036 RPS29P7-201ENST00000439662 171 ntBASIC3.86□□□□□ -1.79
HLA-DPA1P20036 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 VPS26AP1-201ENST00000483197 979 ntBASIC3.86□□□□□ -1.79
HLA-DPA1P20036 AC108941.1-201ENST00000502853 530 ntBASIC3.86□□□□□ -1.79
HLA-DPA1P20036 AC004069.2-201ENST00000505438 1114 ntBASIC3.86□□□□□ -1.79
HLA-DPA1P20036 AC004062.1-201ENST00000509926 645 ntBASIC3.86□□□□□ -1.79
HLA-DPA1P20036 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.86□□□□□ -1.79
HLA-DPA1P20036 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms