Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.35□□□□□ -1.87
NCK1P16333 RN7SL442P-201ENST00000473804 320 ntBASIC3.35□□□□□ -1.87
NCK1P16333 AC078785.3-201ENST00000476607 425 ntBASIC3.35□□□□□ -1.87
NCK1P16333 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.35□□□□□ -1.87
NCK1P16333 AP000563.1-201ENST00000490865 758 ntBASIC3.35□□□□□ -1.87
NCK1P16333 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.35□□□□□ -1.87
NCK1P16333 OR5H5P-201ENST00000503164 928 ntBASIC3.35□□□□□ -1.87
NCK1P16333 MTCO2P9-201ENST00000503214 694 ntBASIC3.35□□□□□ -1.87
NCK1P16333 HMGB1P22-201ENST00000505315 124 ntBASIC3.35□□□□□ -1.87
NCK1P16333 AC118282.2-201ENST00000508739 374 ntBASIC3.35□□□□□ -1.87
NCK1P16333 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.35□□□□□ -1.87
NCK1P16333 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.35□□□□□ -1.87
NCK1P16333 RNU2-27P-201ENST00000516185 142 ntBASIC3.35□□□□□ -1.87
NCK1P16333 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.35□□□□□ -1.87
NCK1P16333 IGKV2D-36-201ENST00000518643 226 ntBASIC3.35□□□□□ -1.87
NCK1P16333 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.35□□□□□ -1.87
NCK1P16333 ARL2BPP5-201ENST00000523141 481 ntBASIC3.35□□□□□ -1.87
NCK1P16333 IGKV2D-19-201ENST00000523346 262 ntBASIC3.35□□□□□ -1.87
NCK1P16333 AP001207.1-201ENST00000524051 481 ntBASIC3.35□□□□□ -1.87
NCK1P16333 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.35□□□□□ -1.87
NCK1P16333 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.35□□□□□ -1.87
NCK1P16333 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
NCK1P16333 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.35□□□□□ -1.87
NCK1P16333 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.35□□□□□ -1.87
NCK1P16333 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.35□□□□□ -1.87
NCK1P16333 RN7SL622P-201ENST00000585292 275 ntBASIC3.35□□□□□ -1.87
NCK1P16333 AC008507.1-201ENST00000587506 734 ntBASIC3.35□□□□□ -1.87
NCK1P16333 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.35□□□□□ -1.87
NCK1P16333 AL606490.9-201ENST00000603331 271 ntBASIC3.35□□□□□ -1.87
NCK1P16333 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.35□□□□□ -1.87
NCK1P16333 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
NCK1P16333 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.35□□□□□ -1.87
NCK1P16333 AL162574.2-201ENST00000614618 657 ntBASIC3.35□□□□□ -1.87
NCK1P16333 MLECP1-201ENST00000615893 709 ntBASIC3.35□□□□□ -1.87
NCK1P16333 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.35□□□□□ -1.87
NCK1P16333 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.35□□□□□ -1.87
NCK1P16333 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
NCK1P16333 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NCK1P16333 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NCK1P16333 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.35□□□□□ -1.87
NCK1P16333 AL513302.2-201ENST00000562313 1842 ntBASIC3.35□□□□□ -1.87
NCK1P16333 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.35□□□□□ -1.87
NCK1P16333 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
NCK1P16333 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.34□□□□□ -1.87
NCK1P16333 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.34□□□□□ -1.87
NCK1P16333 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NCK1P16333 AF127577.6-201ENST00000623352 2191 ntBASIC3.34□□□□□ -1.87
NCK1P16333 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.34□□□□□ -1.87
NCK1P16333 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NCK1P16333 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NCK1P16333 MT-TC-201ENST00000387405 66 ntBASIC3.34□□□□□ -1.87
NCK1P16333 RNU2-71P-201ENST00000411395 189 ntBASIC3.34□□□□□ -1.87
NCK1P16333 RPS7P13-201ENST00000413955 498 ntBASIC3.34□□□□□ -1.87
NCK1P16333 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.34□□□□□ -1.87
NCK1P16333 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.34□□□□□ -1.87
NCK1P16333 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.34□□□□□ -1.87
NCK1P16333 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.34□□□□□ -1.87
NCK1P16333 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.34□□□□□ -1.87
NCK1P16333 RPL21P133-201ENST00000443666 476 ntBASIC3.34□□□□□ -1.87
NCK1P16333 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.34□□□□□ -1.87
NCK1P16333 OR51B8P-201ENST00000449892 769 ntBASIC3.34□□□□□ -1.87
NCK1P16333 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.34□□□□□ -1.87
NCK1P16333 AC006539.3-201ENST00000454258 129 ntBASIC3.34□□□□□ -1.87
NCK1P16333 RPS7P7-201ENST00000463499 571 ntBASIC3.34□□□□□ -1.87
NCK1P16333 RN7SL385P-201ENST00000468873 276 ntBASIC3.34□□□□□ -1.87
NCK1P16333 RPL7P19-201ENST00000469948 618 ntBASIC3.34□□□□□ -1.87
NCK1P16333 MTCO3P35-201ENST00000485582 781 ntBASIC3.34□□□□□ -1.87
NCK1P16333 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.34□□□□□ -1.87
NCK1P16333 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.34□□□□□ -1.87
NCK1P16333 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.34□□□□□ -1.87
NCK1P16333 RNU6-579P-201ENST00000516879 102 ntBASIC3.34□□□□□ -1.87
NCK1P16333 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.34□□□□□ -1.87
NCK1P16333 AP004371.1-201ENST00000525240 214 ntBASIC3.34□□□□□ -1.87
NCK1P16333 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.34□□□□□ -1.87
NCK1P16333 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.34□□□□□ -1.87
NCK1P16333 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.34□□□□□ -1.87
NCK1P16333 AL669831.4-202ENST00000590817 238 ntBASIC3.34□□□□□ -1.87
NCK1P16333 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.34□□□□□ -1.87
NCK1P16333 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.34□□□□□ -1.87
NCK1P16333 AL445423.1-201ENST00000609941 536 ntBASIC3.34□□□□□ -1.87
NCK1P16333 AC005962.2-201ENST00000611427 652 ntBASIC3.34□□□□□ -1.87
NCK1P16333 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NCK1P16333 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.34□□□□□ -1.87
NCK1P16333 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NCK1P16333 MIR492-201ENST00000638676 116 ntBASIC3.34□□□□□ -1.87
NCK1P16333 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NCK1P16333 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
NCK1P16333 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
NCK1P16333 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
NCK1P16333 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NCK1P16333 MIR372-201ENST00000362225 67 ntBASIC3.33□□□□□ -1.88
NCK1P16333 RNU1-32P-201ENST00000363937 159 ntBASIC3.33□□□□□ -1.88
NCK1P16333 RNU6-1181P-201ENST00000384191 106 ntBASIC3.33□□□□□ -1.88
NCK1P16333 RNU6-339P-201ENST00000384310 107 ntBASIC3.33□□□□□ -1.88
NCK1P16333 PTMAP5-201ENST00000393073 333 ntBASIC3.33□□□□□ -1.88
NCK1P16333 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.33□□□□□ -1.88
NCK1P16333 RNA5SP317-201ENST00000410176 116 ntBASIC3.33□□□□□ -1.88
NCK1P16333 RNA5SP311-201ENST00000411290 116 ntBASIC3.33□□□□□ -1.88
NCK1P16333 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.33□□□□□ -1.88
NCK1P16333 AC245054.1-201ENST00000420944 258 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms