Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC2.85□□□□□ -1.95
VCANP13611 AC243972.3-201ENST00000539655 198 ntBASIC2.85□□□□□ -1.95
VCANP13611 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.85□□□□□ -1.95
VCANP13611 AC011270.1-201ENST00000558606 583 ntBASIC2.85□□□□□ -1.95
VCANP13611 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC2.85□□□□□ -1.95
VCANP13611 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.85□□□□□ -1.95
VCANP13611 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.85□□□□□ -1.95
VCANP13611 AL031595.2-201ENST00000624215 19071 ntBASIC2.85□□□□□ -1.95
VCANP13611 RPS4XP5-202ENST00000449995 1334 ntBASIC2.85□□□□□ -1.95
VCANP13611 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
VCANP13611 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
VCANP13611 AL356292.1-201ENST00000283110 373 ntBASIC2.84□□□□□ -1.95
VCANP13611 Y_RNA.178-201ENST00000363832 102 ntBASIC2.84□□□□□ -1.95
VCANP13611 Y_RNA.374-201ENST00000365606 101 ntBASIC2.84□□□□□ -1.95
VCANP13611 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC2.84□□□□□ -1.95
VCANP13611 SNORA31.21-201ENST00000517180 77 ntBASIC2.84□□□□□ -1.95
VCANP13611 IGHV3-63-201ENST00000518422 341 ntBASIC2.84□□□□□ -1.95
VCANP13611 AP001317.1-201ENST00000531194 960 ntBASIC2.84□□□□□ -1.95
VCANP13611 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
VCANP13611 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
VCANP13611 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC2.84□□□□□ -1.95
VCANP13611 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
VCANP13611 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.84□□□□□ -1.95
VCANP13611 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
VCANP13611 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
VCANP13611 AC006989.1-201ENST00000427212 131 ntBASIC2.84□□□□□ -1.95
VCANP13611 MTCO3P21-201ENST00000430791 643 ntBASIC2.84□□□□□ -1.95
VCANP13611 AC091917.2-201ENST00000505002 744 ntBASIC2.84□□□□□ -1.95
VCANP13611 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC2.84□□□□□ -1.95
VCANP13611 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC2.84□□□□□ -1.95
VCANP13611 AC008079.2-201ENST00000623543 20396 ntBASIC2.84□□□□□ -1.95
VCANP13611 AL079305.1-201ENST00000623159 3008 ntBASIC2.84□□□□□ -1.95
VCANP13611 MAPK10-286ENST00000641208 8747 ntBASIC2.84□□□□□ -1.95
VCANP13611 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
VCANP13611 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
VCANP13611 RALGAPA1P1-201ENST00000443361 6232 ntBASIC2.84□□□□□ -1.96
VCANP13611 RNA5SP322-201ENST00000363617 119 ntBASIC2.84□□□□□ -1.96
VCANP13611 RNA5SP104-201ENST00000410989 118 ntBASIC2.84□□□□□ -1.96
VCANP13611 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.84□□□□□ -1.96
VCANP13611 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.84□□□□□ -1.96
VCANP13611 TCP11X3P-202ENST00000514289 1254 ntBASIC2.84□□□□□ -1.96
VCANP13611 AC018630.1-201ENST00000541376 925 ntBASIC2.84□□□□□ -1.96
VCANP13611 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC2.84□□□□□ -1.96
VCANP13611 AL670379.6-201ENST00000603753 252 ntBASIC2.84□□□□□ -1.96
VCANP13611 AL670379.11-201ENST00000604059 253 ntBASIC2.84□□□□□ -1.96
VCANP13611 AL670379.10-201ENST00000604330 253 ntBASIC2.84□□□□□ -1.96
VCANP13611 AC008162.1-201ENST00000604718 254 ntBASIC2.84□□□□□ -1.96
VCANP13611 AL670379.1-201ENST00000604752 252 ntBASIC2.84□□□□□ -1.96
VCANP13611 AL670379.2-201ENST00000604983 252 ntBASIC2.84□□□□□ -1.96
VCANP13611 AL670379.5-201ENST00000605253 252 ntBASIC2.84□□□□□ -1.96
VCANP13611 AL670379.4-201ENST00000605279 254 ntBASIC2.84□□□□□ -1.96
VCANP13611 AL670379.12-201ENST00000605291 253 ntBASIC2.84□□□□□ -1.96
VCANP13611 AL670379.8-201ENST00000605353 252 ntBASIC2.84□□□□□ -1.96
VCANP13611 AL670379.9-201ENST00000605428 253 ntBASIC2.84□□□□□ -1.96
VCANP13611 AL670379.7-201ENST00000605823 252 ntBASIC2.84□□□□□ -1.96
VCANP13611 AC009318.2-201ENST00000610917 651 ntBASIC2.84□□□□□ -1.96
VCANP13611 uc_338.32-201ENST00000615087 172 ntBASIC2.84□□□□□ -1.96
VCANP13611 AC104454.1-201ENST00000421341 1401 ntBASIC2.84□□□□□ -1.96
VCANP13611 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
VCANP13611 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
VCANP13611 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.83□□□□□ -1.96
VCANP13611 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.83□□□□□ -1.96
VCANP13611 AC106872.2-201ENST00000494303 480 ntBASIC2.83□□□□□ -1.96
VCANP13611 AC008083.2-201ENST00000546707 476 ntBASIC2.83□□□□□ -1.96
VCANP13611 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VCANP13611 RNU6-253P-201ENST00000384730 105 ntBASIC2.83□□□□□ -1.96
VCANP13611 MRPS31P2-201ENST00000451581 518 ntBASIC2.83□□□□□ -1.96
VCANP13611 CEACAMP4-201ENST00000457676 421 ntBASIC2.83□□□□□ -1.96
VCANP13611 RN7SL330P-201ENST00000469709 307 ntBASIC2.83□□□□□ -1.96
VCANP13611 OR5G4P-201ENST00000525251 760 ntBASIC2.83□□□□□ -1.96
VCANP13611 AP003385.6-201ENST00000531603 374 ntBASIC2.83□□□□□ -1.96
VCANP13611 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.83□□□□□ -1.96
VCANP13611 snoU13.31-201ENST00000607291 104 ntBASIC2.83□□□□□ -1.96
VCANP13611 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VCANP13611 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC2.83□□□□□ -1.96
VCANP13611 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.83□□□□□ -1.96
VCANP13611 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.83□□□□□ -1.96
VCANP13611 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VCANP13611 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VCANP13611 AC104297.1-201ENST00000393779 870 ntBASIC2.83□□□□□ -1.96
VCANP13611 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC2.83□□□□□ -1.96
VCANP13611 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.83□□□□□ -1.96
VCANP13611 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.83□□□□□ -1.96
VCANP13611 AC078817.1-201ENST00000492623 435 ntBASIC2.83□□□□□ -1.96
VCANP13611 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VCANP13611 AC022069.1-201ENST00000582910 658 ntBASIC2.83□□□□□ -1.96
VCANP13611 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
VCANP13611 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC2.83□□□□□ -1.96
VCANP13611 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
VCANP13611 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VCANP13611 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VCANP13611 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.82□□□□□ -1.96
VCANP13611 ELOCP13-201ENST00000443934 329 ntBASIC2.82□□□□□ -1.96
VCANP13611 RPL5P30-201ENST00000465511 891 ntBASIC2.82□□□□□ -1.96
VCANP13611 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC2.82□□□□□ -1.96
VCANP13611 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.82□□□□□ -1.96
VCANP13611 AP004247.3-201ENST00000608682 624 ntBASIC2.82□□□□□ -1.96
VCANP13611 AP000641.1-201ENST00000531988 1639 ntBASIC2.82□□□□□ -1.96
VCANP13611 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
VCANP13611 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms