Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.6□□□□□ -1.83
TPM1P09493 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.6□□□□□ -1.83
TPM1P09493 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.6□□□□□ -1.83
TPM1P09493 AC007224.1-201ENST00000564410 144 ntBASIC3.6□□□□□ -1.83
TPM1P09493 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.6□□□□□ -1.83
TPM1P09493 AC005972.3-201ENST00000606304 481 ntBASIC3.6□□□□□ -1.83
TPM1P09493 AL354976.1-201ENST00000613843 387 ntBASIC3.6□□□□□ -1.83
TPM1P09493 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.6□□□□□ -1.83
TPM1P09493 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.6□□□□□ -1.83
TPM1P09493 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.59□□□□□ -1.83
TPM1P09493 FAM35CP-201ENST00000554755 2470 ntBASIC3.59□□□□□ -1.83
TPM1P09493 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.59□□□□□ -1.83
TPM1P09493 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.59□□□□□ -1.83
TPM1P09493 AL359837.1-201ENST00000381357 287 ntBASIC3.59□□□□□ -1.83
TPM1P09493 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
TPM1P09493 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
TPM1P09493 PRRC2CP1-201ENST00000404428 159 ntBASIC3.59□□□□□ -1.83
TPM1P09493 MIR1250-201ENST00000408098 113 ntBASIC3.59□□□□□ -1.83
TPM1P09493 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
TPM1P09493 HIGD1AP11-201ENST00000438361 280 ntBASIC3.59□□□□□ -1.83
TPM1P09493 UQCRHP3-201ENST00000451503 251 ntBASIC3.59□□□□□ -1.83
TPM1P09493 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.59□□□□□ -1.83
TPM1P09493 MTCO3P35-201ENST00000485582 781 ntBASIC3.59□□□□□ -1.83
TPM1P09493 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TPM1P09493 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.59□□□□□ -1.83
TPM1P09493 RN7SKP96-201ENST00000516948 297 ntBASIC3.59□□□□□ -1.83
TPM1P09493 AP001207.2-201ENST00000519490 539 ntBASIC3.59□□□□□ -1.83
TPM1P09493 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.59□□□□□ -1.83
TPM1P09493 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.59□□□□□ -1.83
TPM1P09493 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.59□□□□□ -1.83
TPM1P09493 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.59□□□□□ -1.83
TPM1P09493 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.59□□□□□ -1.83
TPM1P09493 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.59□□□□□ -1.83
TPM1P09493 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.59□□□□□ -1.83
TPM1P09493 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.59□□□□□ -1.83
TPM1P09493 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.59□□□□□ -1.83
TPM1P09493 AC005951.1-201ENST00000576706 485 ntBASIC3.59□□□□□ -1.83
TPM1P09493 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.59□□□□□ -1.83
TPM1P09493 IGHV3-29-201ENST00000604817 344 ntBASIC3.59□□□□□ -1.83
TPM1P09493 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
TPM1P09493 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.59□□□□□ -1.83
TPM1P09493 ZNF37BP-203ENST00000452306 1352 ntBASIC3.59□□□□□ -1.83
TPM1P09493 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
TPM1P09493 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
TPM1P09493 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.58□□□□□ -1.84
TPM1P09493 AL365440.1-201ENST00000436135 2167 ntBASIC3.58□□□□□ -1.84
TPM1P09493 SNORA46-201ENST00000384762 135 ntBASIC3.58□□□□□ -1.84
TPM1P09493 MIR1303-201ENST00000408625 86 ntBASIC3.58□□□□□ -1.84
TPM1P09493 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.58□□□□□ -1.84
TPM1P09493 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.58□□□□□ -1.84
TPM1P09493 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TPM1P09493 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TPM1P09493 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.58□□□□□ -1.84
TPM1P09493 NECAP1P2-201ENST00000455668 727 ntBASIC3.58□□□□□ -1.84
TPM1P09493 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.58□□□□□ -1.84
TPM1P09493 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.58□□□□□ -1.84
TPM1P09493 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.58□□□□□ -1.84
TPM1P09493 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.58□□□□□ -1.84
TPM1P09493 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.58□□□□□ -1.84
TPM1P09493 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.58□□□□□ -1.84
TPM1P09493 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.58□□□□□ -1.84
TPM1P09493 MIR4443-201ENST00000585052 53 ntBASIC3.58□□□□□ -1.84
TPM1P09493 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.58□□□□□ -1.84
TPM1P09493 AC004832.5-201ENST00000608677 401 ntBASIC3.58□□□□□ -1.84
TPM1P09493 AL157817.1-201ENST00000614264 790 ntBASIC3.58□□□□□ -1.84
TPM1P09493 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TPM1P09493 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TPM1P09493 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.58□□□□□ -1.84
TPM1P09493 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TPM1P09493 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
TPM1P09493 AC002546.1-201ENST00000588041 2504 ntBASIC3.58□□□□□ -1.84
TPM1P09493 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TPM1P09493 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
TPM1P09493 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
TPM1P09493 RN7SKP280-201ENST00000364196 304 ntBASIC3.57□□□□□ -1.84
TPM1P09493 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TPM1P09493 RPL21P17-201ENST00000397467 475 ntBASIC3.57□□□□□ -1.84
TPM1P09493 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.57□□□□□ -1.84
TPM1P09493 RNA5SP344-201ENST00000411081 104 ntBASIC3.57□□□□□ -1.84
TPM1P09493 AC093151.1-201ENST00000427711 313 ntBASIC3.57□□□□□ -1.84
TPM1P09493 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.57□□□□□ -1.84
TPM1P09493 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.57□□□□□ -1.84
TPM1P09493 ELOCP13-201ENST00000443934 329 ntBASIC3.57□□□□□ -1.84
TPM1P09493 AC069540.1-201ENST00000446320 988 ntBASIC3.57□□□□□ -1.84
TPM1P09493 GAPDHP27-201ENST00000447427 1020 ntBASIC3.57□□□□□ -1.84
TPM1P09493 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.57□□□□□ -1.84
TPM1P09493 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TPM1P09493 AC118282.1-201ENST00000506408 765 ntBASIC3.57□□□□□ -1.84
TPM1P09493 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.57□□□□□ -1.84
TPM1P09493 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.57□□□□□ -1.84
TPM1P09493 RPL7L1P13-201ENST00000511702 739 ntBASIC3.57□□□□□ -1.84
TPM1P09493 AC119751.1-201ENST00000513357 765 ntBASIC3.57□□□□□ -1.84
TPM1P09493 MTCO2P32-201ENST00000514865 403 ntBASIC3.57□□□□□ -1.84
TPM1P09493 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.57□□□□□ -1.84
TPM1P09493 AF279873.1-201ENST00000523393 313 ntBASIC3.57□□□□□ -1.84
TPM1P09493 AP004371.1-201ENST00000525240 214 ntBASIC3.57□□□□□ -1.84
TPM1P09493 AC109635.4-202ENST00000531666 412 ntBASIC3.57□□□□□ -1.84
TPM1P09493 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.57□□□□□ -1.84
TPM1P09493 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.57□□□□□ -1.84
TPM1P09493 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms