Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AL133264.1-201ENST00000407157 562 ntBASIC4.42□□□□□ -1.7
MMP3P08254 AL136133.1-201ENST00000413694 376 ntBASIC4.42□□□□□ -1.7
MMP3P08254 AL049737.1-201ENST00000413920 1403 ntBASIC4.42□□□□□ -1.7
MMP3P08254 AC016907.1-201ENST00000419483 435 ntBASIC4.42□□□□□ -1.7
MMP3P08254 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.42□□□□□ -1.7
MMP3P08254 AC005345.1-201ENST00000431868 217 ntBASIC4.42□□□□□ -1.7
MMP3P08254 RPL23AP83-201ENST00000434984 473 ntBASIC4.42□□□□□ -1.7
MMP3P08254 MTCYBP34-201ENST00000439552 670 ntBASIC4.42□□□□□ -1.7
MMP3P08254 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.42□□□□□ -1.7
MMP3P08254 AL357520.1-201ENST00000441557 453 ntBASIC4.42□□□□□ -1.7
MMP3P08254 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.42□□□□□ -1.7
MMP3P08254 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.42□□□□□ -1.7
MMP3P08254 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.42□□□□□ -1.7
MMP3P08254 RPL7P15-201ENST00000461190 712 ntBASIC4.42□□□□□ -1.7
MMP3P08254 RPL7P18-201ENST00000478965 734 ntBASIC4.42□□□□□ -1.7
MMP3P08254 RPF2P2-201ENST00000504693 896 ntBASIC4.42□□□□□ -1.7
MMP3P08254 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
MMP3P08254 WBP1LP4-201ENST00000505043 344 ntBASIC4.42□□□□□ -1.7
MMP3P08254 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.42□□□□□ -1.7
MMP3P08254 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.42□□□□□ -1.7
MMP3P08254 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.42□□□□□ -1.7
MMP3P08254 HSPE1P23-201ENST00000509838 286 ntBASIC4.42□□□□□ -1.7
MMP3P08254 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.42□□□□□ -1.7
MMP3P08254 TCP11X3P-202ENST00000514289 1254 ntBASIC4.42□□□□□ -1.7
MMP3P08254 RNU6-1225P-201ENST00000516336 65 ntBASIC4.42□□□□□ -1.7
MMP3P08254 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.42□□□□□ -1.7
MMP3P08254 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.42□□□□□ -1.7
MMP3P08254 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.42□□□□□ -1.7
MMP3P08254 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.42□□□□□ -1.7
MMP3P08254 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
MMP3P08254 AC072039.2-201ENST00000608883 439 ntBASIC4.42□□□□□ -1.7
MMP3P08254 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
MMP3P08254 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
MMP3P08254 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
MMP3P08254 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
MMP3P08254 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
MMP3P08254 AC073530.2-201ENST00000623987 261 ntBASIC4.42□□□□□ -1.7
MMP3P08254 CR392039.4-201ENST00000624968 501 ntBASIC4.42□□□□□ -1.7
MMP3P08254 BMS1P21-201ENST00000634565 365 ntBASIC4.42□□□□□ -1.7
MMP3P08254 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
MMP3P08254 AP002001.2-201ENST00000529025 1469 ntBASIC4.42□□□□□ -1.7
MMP3P08254 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
MMP3P08254 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
MMP3P08254 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.42□□□□□ -1.7
MMP3P08254 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
MMP3P08254 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
MMP3P08254 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.41□□□□□ -1.7
MMP3P08254 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
MMP3P08254 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
MMP3P08254 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
MMP3P08254 SCN1A-220ENST00000641603 12506 ntBASIC4.41□□□□□ -1.7
MMP3P08254 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
MMP3P08254 ZNF285B-201ENST00000561698 1767 ntBASIC4.41□□□□□ -1.7
MMP3P08254 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
MMP3P08254 RNA5SP97-201ENST00000365006 84 ntBASIC4.41□□□□□ -1.7
MMP3P08254 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.41□□□□□ -1.7
MMP3P08254 RNU6-1300P-201ENST00000391046 108 ntBASIC4.41□□□□□ -1.7
MMP3P08254 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.41□□□□□ -1.7
MMP3P08254 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.41□□□□□ -1.7
MMP3P08254 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
MMP3P08254 AC098592.1-201ENST00000419352 333 ntBASIC4.41□□□□□ -1.7
MMP3P08254 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.41□□□□□ -1.7
MMP3P08254 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
MMP3P08254 RPS26P40-201ENST00000435209 294 ntBASIC4.41□□□□□ -1.7
MMP3P08254 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.41□□□□□ -1.7
MMP3P08254 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.41□□□□□ -1.7
MMP3P08254 UBE2D3P4-201ENST00000441973 436 ntBASIC4.41□□□□□ -1.7
MMP3P08254 RPL23AP15-201ENST00000450202 459 ntBASIC4.41□□□□□ -1.7
MMP3P08254 RPL37P3-201ENST00000456825 293 ntBASIC4.41□□□□□ -1.7
MMP3P08254 MTND1P16-201ENST00000465177 898 ntBASIC4.41□□□□□ -1.7
MMP3P08254 MTND3P7-201ENST00000474435 343 ntBASIC4.41□□□□□ -1.7
MMP3P08254 RPS3AP43-201ENST00000479743 781 ntBASIC4.41□□□□□ -1.7
MMP3P08254 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.41□□□□□ -1.7
MMP3P08254 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.41□□□□□ -1.7
MMP3P08254 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.41□□□□□ -1.7
MMP3P08254 AC008885.2-201ENST00000509506 930 ntBASIC4.41□□□□□ -1.7
MMP3P08254 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
MMP3P08254 AC079395.1-201ENST00000510981 262 ntBASIC4.41□□□□□ -1.7
MMP3P08254 RNU6-232P-201ENST00000517144 64 ntBASIC4.41□□□□□ -1.7
MMP3P08254 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.41□□□□□ -1.7
MMP3P08254 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.41□□□□□ -1.7
MMP3P08254 AC087369.1-201ENST00000520775 996 ntBASIC4.41□□□□□ -1.7
MMP3P08254 HIGD1AP6-201ENST00000521833 279 ntBASIC4.41□□□□□ -1.7
MMP3P08254 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
MMP3P08254 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.41□□□□□ -1.7
MMP3P08254 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.41□□□□□ -1.7
MMP3P08254 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.41□□□□□ -1.7
MMP3P08254 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.41□□□□□ -1.7
MMP3P08254 AC135628.1-201ENST00000568867 534 ntBASIC4.41□□□□□ -1.7
MMP3P08254 AP005136.1-201ENST00000579765 429 ntBASIC4.41□□□□□ -1.7
MMP3P08254 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.41□□□□□ -1.7
MMP3P08254 PSMA6P4-201ENST00000603247 718 ntBASIC4.41□□□□□ -1.7
MMP3P08254 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.41□□□□□ -1.7
MMP3P08254 AC005344.1-201ENST00000613391 459 ntBASIC4.41□□□□□ -1.7
MMP3P08254 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
MMP3P08254 AP003072.4-201ENST00000624580 310 ntBASIC4.41□□□□□ -1.7
MMP3P08254 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
MMP3P08254 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.41□□□□□ -1.7
MMP3P08254 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.41□□□□□ -1.7
MMP3P08254 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms