Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.27□□□□□ -1.89
ERCC1P07992 AC113368.1-201ENST00000603736 382 ntBASIC3.27□□□□□ -1.89
ERCC1P07992 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.27□□□□□ -1.89
ERCC1P07992 RNVU1-4-201ENST00000612985 164 ntBASIC3.27□□□□□ -1.89
ERCC1P07992 AL163051.2-201ENST00000618976 735 ntBASIC3.27□□□□□ -1.89
ERCC1P07992 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
ERCC1P07992 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
ERCC1P07992 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
ERCC1P07992 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ERCC1P07992 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
ERCC1P07992 PRO1804-201ENST00000623780 2050 ntBASIC3.26□□□□□ -1.89
ERCC1P07992 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.26□□□□□ -1.89
ERCC1P07992 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
ERCC1P07992 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
ERCC1P07992 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.26□□□□□ -1.89
ERCC1P07992 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
ERCC1P07992 MIR449B-201ENST00000384995 97 ntBASIC3.26□□□□□ -1.89
ERCC1P07992 MIR670-201ENST00000390142 98 ntBASIC3.26□□□□□ -1.89
ERCC1P07992 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.26□□□□□ -1.89
ERCC1P07992 AL583834.1-201ENST00000406943 343 ntBASIC3.26□□□□□ -1.89
ERCC1P07992 AL158825.1-201ENST00000414735 521 ntBASIC3.26□□□□□ -1.89
ERCC1P07992 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ERCC1P07992 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.26□□□□□ -1.89
ERCC1P07992 AC002075.2-201ENST00000425207 252 ntBASIC3.26□□□□□ -1.89
ERCC1P07992 AC114973.1-201ENST00000429057 632 ntBASIC3.26□□□□□ -1.89
ERCC1P07992 NEK4P1-201ENST00000433383 879 ntBASIC3.26□□□□□ -1.89
ERCC1P07992 MRPS18BP2-201ENST00000434310 759 ntBASIC3.26□□□□□ -1.89
ERCC1P07992 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.26□□□□□ -1.89
ERCC1P07992 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.26□□□□□ -1.89
ERCC1P07992 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.26□□□□□ -1.89
ERCC1P07992 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.26□□□□□ -1.89
ERCC1P07992 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.26□□□□□ -1.89
ERCC1P07992 NPM1P13-201ENST00000452663 865 ntBASIC3.26□□□□□ -1.89
ERCC1P07992 RPS24P6-201ENST00000452670 400 ntBASIC3.26□□□□□ -1.89
ERCC1P07992 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.26□□□□□ -1.89
ERCC1P07992 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.26□□□□□ -1.89
ERCC1P07992 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.26□□□□□ -1.89
ERCC1P07992 MTCO2P32-201ENST00000514865 403 ntBASIC3.26□□□□□ -1.89
ERCC1P07992 SNORA67.7-201ENST00000516664 135 ntBASIC3.26□□□□□ -1.89
ERCC1P07992 HIGD1AP6-201ENST00000521833 279 ntBASIC3.26□□□□□ -1.89
ERCC1P07992 AC022695.1-201ENST00000522089 237 ntBASIC3.26□□□□□ -1.89
ERCC1P07992 AP000926.4-201ENST00000527351 454 ntBASIC3.26□□□□□ -1.89
ERCC1P07992 AP003385.6-201ENST00000531603 374 ntBASIC3.26□□□□□ -1.89
ERCC1P07992 MIR4429-201ENST00000580105 73 ntBASIC3.26□□□□□ -1.89
ERCC1P07992 MIR3944-201ENST00000581277 108 ntBASIC3.26□□□□□ -1.89
ERCC1P07992 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.26□□□□□ -1.89
ERCC1P07992 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.26□□□□□ -1.89
ERCC1P07992 AC021851.1-201ENST00000608537 1082 ntBASIC3.26□□□□□ -1.89
ERCC1P07992 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.26□□□□□ -1.89
ERCC1P07992 AC096586.1-201ENST00000610267 561 ntBASIC3.26□□□□□ -1.89
ERCC1P07992 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
ERCC1P07992 MIR6075-201ENST00000620782 95 ntBASIC3.26□□□□□ -1.89
ERCC1P07992 AC006963.1-201ENST00000624003 1052 ntBASIC3.26□□□□□ -1.89
ERCC1P07992 AL672296.1-201ENST00000427780 2158 ntBASIC3.26□□□□□ -1.89
ERCC1P07992 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
ERCC1P07992 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ERCC1P07992 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.26□□□□□ -1.89
ERCC1P07992 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.26□□□□□ -1.89
ERCC1P07992 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.25□□□□□ -1.89
ERCC1P07992 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ERCC1P07992 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ERCC1P07992 MIR525-201ENST00000384978 85 ntBASIC3.25□□□□□ -1.89
ERCC1P07992 MIR591-201ENST00000385290 95 ntBASIC3.25□□□□□ -1.89
ERCC1P07992 ATF1P1-201ENST00000406040 927 ntBASIC3.25□□□□□ -1.89
ERCC1P07992 RNA5SP56-201ENST00000410277 118 ntBASIC3.25□□□□□ -1.89
ERCC1P07992 UBE2V1P9-201ENST00000414760 368 ntBASIC3.25□□□□□ -1.89
ERCC1P07992 PAICSP7-201ENST00000419829 962 ntBASIC3.25□□□□□ -1.89
ERCC1P07992 RPS7P2-201ENST00000435134 607 ntBASIC3.25□□□□□ -1.89
ERCC1P07992 TXNP1-201ENST00000441872 371 ntBASIC3.25□□□□□ -1.89
ERCC1P07992 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.25□□□□□ -1.89
ERCC1P07992 AL034418.1-201ENST00000448675 860 ntBASIC3.25□□□□□ -1.89
ERCC1P07992 SLC31A1P1-201ENST00000451221 567 ntBASIC3.25□□□□□ -1.89
ERCC1P07992 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.25□□□□□ -1.89
ERCC1P07992 snoU13.24-201ENST00000458998 104 ntBASIC3.25□□□□□ -1.89
ERCC1P07992 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.25□□□□□ -1.89
ERCC1P07992 AL024509.2-201ENST00000493462 493 ntBASIC3.25□□□□□ -1.89
ERCC1P07992 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.25□□□□□ -1.89
ERCC1P07992 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.25□□□□□ -1.89
ERCC1P07992 AC093853.1-201ENST00000515689 483 ntBASIC3.25□□□□□ -1.89
ERCC1P07992 RN7SKP18-201ENST00000516005 275 ntBASIC3.25□□□□□ -1.89
ERCC1P07992 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.25□□□□□ -1.89
ERCC1P07992 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.25□□□□□ -1.89
ERCC1P07992 AL389895.1-201ENST00000554127 252 ntBASIC3.25□□□□□ -1.89
ERCC1P07992 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.25□□□□□ -1.89
ERCC1P07992 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.25□□□□□ -1.89
ERCC1P07992 AC087499.8-201ENST00000578406 226 ntBASIC3.25□□□□□ -1.89
ERCC1P07992 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.25□□□□□ -1.89
ERCC1P07992 MIR5187-201ENST00000583479 76 ntBASIC3.25□□□□□ -1.89
ERCC1P07992 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.25□□□□□ -1.89
ERCC1P07992 BNIP3P22-201ENST00000593399 556 ntBASIC3.25□□□□□ -1.89
ERCC1P07992 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ERCC1P07992 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ERCC1P07992 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ERCC1P07992 AL392048.1-201ENST00000613946 534 ntBASIC3.25□□□□□ -1.89
ERCC1P07992 AC008121.2-201ENST00000614647 523 ntBASIC3.25□□□□□ -1.89
ERCC1P07992 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ERCC1P07992 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.25□□□□□ -1.89
ERCC1P07992 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ERCC1P07992 AC010733.2-201ENST00000589496 5702 ntBASIC3.25□□□□□ -1.89
ERCC1P07992 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms