Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 OR6C72P-201ENST00000451403 892 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.98□□□□□ -1.77
COL2A1P02458 AC010468.1-201ENST00000461022 817 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.98□□□□□ -1.77
COL2A1P02458 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.98□□□□□ -1.77
COL2A1P02458 AC010486.3-201ENST00000511602 785 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.98□□□□□ -1.77
COL2A1P02458 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.98□□□□□ -1.77
COL2A1P02458 APOOP4-201ENST00000513530 597 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.98□□□□□ -1.77
COL2A1P02458 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.98□□□□□ -1.77
COL2A1P02458 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.98□□□□□ -1.77
COL2A1P02458 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.98□□□□□ -1.77
COL2A1P02458 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.98□□□□□ -1.77
COL2A1P02458 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.98□□□□□ -1.77
COL2A1P02458 AC009097.3-201ENST00000563557 1018 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 AP005136.1-201ENST00000579765 429 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.98□□□□□ -1.77
COL2A1P02458 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.98□□□□□ -1.77
COL2A1P02458 AC068790.2-201ENST00000602601 557 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 AL353778.1-201ENST00000603149 408 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.98□□□□□ -1.77
COL2A1P02458 RNU4-5P-201ENST00000607255 135 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 AC004241.3-201ENST00000611728 517 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 AL512427.1-201ENST00000618593 349 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 SNORD39.4-201ENST00000620099 78 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.98□□□□□ -1.77
COL2A1P02458 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.98□□□□□ -1.77
COL2A1P02458 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 ZNF90P1-201ENST00000480493 1951 ntBASIC3.97□□□□□ -1.77
COL2A1P02458 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
COL2A1P02458 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL2A1P02458 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL2A1P02458 RNA5SP322-201ENST00000363617 119 ntBASIC3.97□□□□□ -1.77
COL2A1P02458 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
COL2A1P02458 RNA5SP229-201ENST00000410809 99 ntBASIC3.97□□□□□ -1.77
COL2A1P02458 RNU4-47P-201ENST00000410876 114 ntBASIC3.97□□□□□ -1.77
COL2A1P02458 UBE2V1P11-201ENST00000411559 285 ntBASIC3.97□□□□□ -1.77
COL2A1P02458 AC096533.1-201ENST00000411645 353 ntBASIC3.97□□□□□ -1.77
COL2A1P02458 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.97□□□□□ -1.77
COL2A1P02458 LIPT1P1-201ENST00000415870 1186 ntBASIC3.97□□□□□ -1.77
COL2A1P02458 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.97□□□□□ -1.77
COL2A1P02458 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.97□□□□□ -1.77
COL2A1P02458 NANOGP5-201ENST00000424456 877 ntBASIC3.97□□□□□ -1.77
COL2A1P02458 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.97□□□□□ -1.77
COL2A1P02458 AL353705.1-201ENST00000433468 480 ntBASIC3.97□□□□□ -1.77
COL2A1P02458 MTND4P10-201ENST00000446199 1363 ntBASIC3.97□□□□□ -1.77
COL2A1P02458 NANOGNBP1-201ENST00000448444 480 ntBASIC3.97□□□□□ -1.77
COL2A1P02458 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
COL2A1P02458 RPS3AP50-201ENST00000487064 803 ntBASIC3.97□□□□□ -1.77
COL2A1P02458 RN7SL504P-201ENST00000494496 287 ntBASIC3.97□□□□□ -1.77
COL2A1P02458 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.97□□□□□ -1.77
COL2A1P02458 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.97□□□□□ -1.77
COL2A1P02458 PTGES3P3-201ENST00000511479 482 ntBASIC3.97□□□□□ -1.77
COL2A1P02458 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
COL2A1P02458 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.97□□□□□ -1.77
COL2A1P02458 Y_RNA.655-201ENST00000515919 96 ntBASIC3.97□□□□□ -1.77
COL2A1P02458 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.97□□□□□ -1.77
COL2A1P02458 AC087373.1-201ENST00000524920 491 ntBASIC3.97□□□□□ -1.77
COL2A1P02458 ZNF321P-202ENST00000550843 495 ntBASIC3.97□□□□□ -1.77
COL2A1P02458 PIGPP4-201ENST00000584447 307 ntBASIC3.97□□□□□ -1.77
COL2A1P02458 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.97□□□□□ -1.77
COL2A1P02458 VN1R78P-201ENST00000597393 564 ntBASIC3.97□□□□□ -1.77
COL2A1P02458 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.97□□□□□ -1.77
COL2A1P02458 RPP40P2-201ENST00000603596 712 ntBASIC3.97□□□□□ -1.77
COL2A1P02458 AL160237.3-201ENST00000604114 1013 ntBASIC3.97□□□□□ -1.77
COL2A1P02458 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.97□□□□□ -1.77
COL2A1P02458 AC013562.2-201ENST00000611632 603 ntBASIC3.97□□□□□ -1.77
COL2A1P02458 AC022306.2-201ENST00000617563 647 ntBASIC3.97□□□□□ -1.77
COL2A1P02458 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.97□□□□□ -1.77
COL2A1P02458 BX649567.1-201ENST00000642071 1134 ntBASIC3.97□□□□□ -1.77
COL2A1P02458 AC005332.5-201ENST00000591222 2919 ntBASIC3.96□□□□□ -1.77
COL2A1P02458 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC3.96□□□□□ -1.78
COL2A1P02458 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
COL2A1P02458 AC087190.4-201ENST00000574616 8334 ntBASIC3.96□□□□□ -1.78
COL2A1P02458 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL2A1P02458 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
COL2A1P02458 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL2A1P02458 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL2A1P02458 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL2A1P02458 RNU6-1257P-201ENST00000384625 110 ntBASIC3.96□□□□□ -1.78
COL2A1P02458 HMGN1P24-201ENST00000412282 298 ntBASIC3.96□□□□□ -1.78
COL2A1P02458 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.96□□□□□ -1.78
COL2A1P02458 AC004552.1-201ENST00000419089 348 ntBASIC3.96□□□□□ -1.78
COL2A1P02458 COTL1P1-201ENST00000422309 375 ntBASIC3.96□□□□□ -1.78
COL2A1P02458 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.96□□□□□ -1.78
COL2A1P02458 PTP4A1P3-201ENST00000433661 420 ntBASIC3.96□□□□□ -1.78
COL2A1P02458 AL357552.1-201ENST00000445254 415 ntBASIC3.96□□□□□ -1.78
COL2A1P02458 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.96□□□□□ -1.78
COL2A1P02458 RPL31P53-201ENST00000457065 348 ntBASIC3.96□□□□□ -1.78
COL2A1P02458 AP002371.1-201ENST00000463604 433 ntBASIC3.96□□□□□ -1.78
COL2A1P02458 AC090543.2-201ENST00000483963 348 ntBASIC3.96□□□□□ -1.78
COL2A1P02458 AC006445.1-201ENST00000491925 405 ntBASIC3.96□□□□□ -1.78
COL2A1P02458 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.96□□□□□ -1.78
COL2A1P02458 AC121161.1-201ENST00000510606 652 ntBASIC3.96□□□□□ -1.78
COL2A1P02458 AC008494.2-201ENST00000514544 370 ntBASIC3.96□□□□□ -1.78
COL2A1P02458 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.96□□□□□ -1.78
COL2A1P02458 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
COL2A1P02458 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.96□□□□□ -1.78
COL2A1P02458 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms