Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC112484.5-201ENST00000624189 228 ntBASIC3.82□□□□□ -1.8
PRKNO60260 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
PRKNO60260 Z73965.1-201ENST00000623412 2297 ntBASIC3.82□□□□□ -1.8
PRKNO60260 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
PRKNO60260 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
PRKNO60260 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PRKNO60260 AC016588.2-201ENST00000632484 3021 ntBASIC3.81□□□□□ -1.8
PRKNO60260 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.81□□□□□ -1.8
PRKNO60260 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.81□□□□□ -1.8
PRKNO60260 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PRKNO60260 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRKNO60260 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PRKNO60260 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRKNO60260 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
PRKNO60260 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PRKNO60260 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
PRKNO60260 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PRKNO60260 SNORA4.1-201ENST00000364263 144 ntBASIC3.81□□□□□ -1.8
PRKNO60260 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRKNO60260 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PRKNO60260 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PRKNO60260 ENSAP1-201ENST00000392855 326 ntBASIC3.81□□□□□ -1.8
PRKNO60260 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PRKNO60260 RPL21P65-201ENST00000406094 466 ntBASIC3.81□□□□□ -1.8
PRKNO60260 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PRKNO60260 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.81□□□□□ -1.8
PRKNO60260 AC108032.1-201ENST00000416706 207 ntBASIC3.81□□□□□ -1.8
PRKNO60260 AC009237.2-201ENST00000421358 284 ntBASIC3.81□□□□□ -1.8
PRKNO60260 RPP40P1-201ENST00000426762 456 ntBASIC3.81□□□□□ -1.8
PRKNO60260 AL117339.2-201ENST00000430475 180 ntBASIC3.81□□□□□ -1.8
PRKNO60260 AL358472.1-201ENST00000431295 329 ntBASIC3.81□□□□□ -1.8
PRKNO60260 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.81□□□□□ -1.8
PRKNO60260 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.81□□□□□ -1.8
PRKNO60260 YWHAZP8-201ENST00000436935 731 ntBASIC3.81□□□□□ -1.8
PRKNO60260 ISCA1P2-201ENST00000438679 421 ntBASIC3.81□□□□□ -1.8
PRKNO60260 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.81□□□□□ -1.8
PRKNO60260 AC073587.1-201ENST00000447093 876 ntBASIC3.81□□□□□ -1.8
PRKNO60260 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PRKNO60260 AC097262.1-201ENST00000452559 548 ntBASIC3.81□□□□□ -1.8
PRKNO60260 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.81□□□□□ -1.8
PRKNO60260 AC092754.2-201ENST00000463506 460 ntBASIC3.81□□□□□ -1.8
PRKNO60260 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.81□□□□□ -1.8
PRKNO60260 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.81□□□□□ -1.8
PRKNO60260 AC093281.2-201ENST00000510153 597 ntBASIC3.81□□□□□ -1.8
PRKNO60260 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.81□□□□□ -1.8
PRKNO60260 AC108064.1-201ENST00000513791 460 ntBASIC3.81□□□□□ -1.8
PRKNO60260 RNU6-1261P-201ENST00000517194 104 ntBASIC3.81□□□□□ -1.8
PRKNO60260 AC084824.1-201ENST00000550917 1005 ntBASIC3.81□□□□□ -1.8
PRKNO60260 HMGB3P26-201ENST00000560051 582 ntBASIC3.81□□□□□ -1.8
PRKNO60260 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.81□□□□□ -1.8
PRKNO60260 AC012435.1-202ENST00000568772 240 ntBASIC3.81□□□□□ -1.8
PRKNO60260 MTCYBP33-201ENST00000575007 1130 ntBASIC3.81□□□□□ -1.8
PRKNO60260 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.81□□□□□ -1.8
PRKNO60260 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.81□□□□□ -1.8
PRKNO60260 MIR3915-201ENST00000578518 97 ntBASIC3.81□□□□□ -1.8
PRKNO60260 NBR2-204ENST00000587322 63 ntBASIC3.81□□□□□ -1.8
PRKNO60260 AL353600.1-201ENST00000608148 251 ntBASIC3.81□□□□□ -1.8
PRKNO60260 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.81□□□□□ -1.8
PRKNO60260 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.81□□□□□ -1.8
PRKNO60260 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.81□□□□□ -1.8
PRKNO60260 AC008083.4-201ENST00000615076 444 ntBASIC3.81□□□□□ -1.8
PRKNO60260 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRKNO60260 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.81□□□□□ -1.8
PRKNO60260 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRKNO60260 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
PRKNO60260 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PRKNO60260 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.81□□□□□ -1.8
PRKNO60260 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.81□□□□□ -1.8
PRKNO60260 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PRKNO60260 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PRKNO60260 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.8□□□□□ -1.8
PRKNO60260 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.8□□□□□ -1.8
PRKNO60260 CDR1-202ENST00000625883 1485 ntBASIC3.8□□□□□ -1.8
PRKNO60260 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PRKNO60260 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PRKNO60260 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PRKNO60260 AL118496.1-201ENST00000440201 1812 ntBASIC3.8□□□□□ -1.8
PRKNO60260 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PRKNO60260 Y_RNA.25-201ENST00000362528 102 ntBASIC3.8□□□□□ -1.8
PRKNO60260 SNORD35B-201ENST00000363660 87 ntBASIC3.8□□□□□ -1.8
PRKNO60260 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PRKNO60260 MTCO3P31-201ENST00000405526 789 ntBASIC3.8□□□□□ -1.8
PRKNO60260 AL356967.1-201ENST00000406305 431 ntBASIC3.8□□□□□ -1.8
PRKNO60260 RNU4-6P-201ENST00000410804 122 ntBASIC3.8□□□□□ -1.8
PRKNO60260 HSPE1P12-201ENST00000412576 301 ntBASIC3.8□□□□□ -1.8
PRKNO60260 MORF4L1P6-201ENST00000418771 268 ntBASIC3.8□□□□□ -1.8
PRKNO60260 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.8□□□□□ -1.8
PRKNO60260 AC233981.1-201ENST00000423224 461 ntBASIC3.8□□□□□ -1.8
PRKNO60260 IPMKP1-201ENST00000425988 855 ntBASIC3.8□□□□□ -1.8
PRKNO60260 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.8□□□□□ -1.8
PRKNO60260 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.8□□□□□ -1.8
PRKNO60260 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.8□□□□□ -1.8
PRKNO60260 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.8□□□□□ -1.8
PRKNO60260 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.8□□□□□ -1.8
PRKNO60260 AC073387.1-201ENST00000453261 709 ntBASIC3.8□□□□□ -1.8
PRKNO60260 MTCO3P16-201ENST00000454456 754 ntBASIC3.8□□□□□ -1.8
PRKNO60260 RPL31P3-201ENST00000458430 332 ntBASIC3.8□□□□□ -1.8
PRKNO60260 MTND6P6-201ENST00000478031 263 ntBASIC3.8□□□□□ -1.8
PRKNO60260 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.8□□□□□ -1.8
PRKNO60260 PPBPP1-201ENST00000510807 373 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms