Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 TPTEP1-208ENST00000636884 213 ntBASIC5.32□□□□□ -1.56
RFXAPO00287 MKKS-204ENST00000639674 192 ntBASIC5.32□□□□□ -1.56
RFXAPO00287 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
RFXAPO00287 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.32□□□□□ -1.56
RFXAPO00287 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFXAPO00287 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFXAPO00287 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFXAPO00287 AC100757.1-201ENST00000616872 1835 ntBASIC5.32□□□□□ -1.56
RFXAPO00287 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
RFXAPO00287 FARSBP1-201ENST00000435808 1778 ntBASIC5.32□□□□□ -1.56
RFXAPO00287 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RFXAPO00287 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RFXAPO00287 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.31□□□□□ -1.56
RFXAPO00287 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.31□□□□□ -1.56
RFXAPO00287 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
RFXAPO00287 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFXAPO00287 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RFXAPO00287 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RFXAPO00287 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFXAPO00287 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC5.31□□□□□ -1.56
RFXAPO00287 Y_RNA.159-201ENST00000363674 87 ntBASIC5.31□□□□□ -1.56
RFXAPO00287 Y_RNA.184-201ENST00000363884 108 ntBASIC5.31□□□□□ -1.56
RFXAPO00287 AL359837.1-201ENST00000381357 287 ntBASIC5.31□□□□□ -1.56
RFXAPO00287 RNU6-463P-201ENST00000384340 107 ntBASIC5.31□□□□□ -1.56
RFXAPO00287 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.31□□□□□ -1.56
RFXAPO00287 RPL32P23-201ENST00000397237 405 ntBASIC5.31□□□□□ -1.56
RFXAPO00287 AL354719.1-201ENST00000406535 843 ntBASIC5.31□□□□□ -1.56
RFXAPO00287 SNORA11C-201ENST00000408532 129 ntBASIC5.31□□□□□ -1.56
RFXAPO00287 RN7SKP58-201ENST00000411010 305 ntBASIC5.31□□□□□ -1.56
RFXAPO00287 BX510359.2-201ENST00000417920 305 ntBASIC5.31□□□□□ -1.56
RFXAPO00287 AC114814.2-201ENST00000419195 485 ntBASIC5.31□□□□□ -1.56
RFXAPO00287 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.31□□□□□ -1.56
RFXAPO00287 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.31□□□□□ -1.56
RFXAPO00287 CALM1P1-201ENST00000442082 433 ntBASIC5.31□□□□□ -1.56
RFXAPO00287 RPL18AP17-201ENST00000455326 198 ntBASIC5.31□□□□□ -1.56
RFXAPO00287 AC091180.1-201ENST00000462104 372 ntBASIC5.31□□□□□ -1.56
RFXAPO00287 AC010307.1-201ENST00000467206 836 ntBASIC5.31□□□□□ -1.56
RFXAPO00287 AC034236.1-201ENST00000469891 373 ntBASIC5.31□□□□□ -1.56
RFXAPO00287 AC093840.1-201ENST00000511599 336 ntBASIC5.31□□□□□ -1.56
RFXAPO00287 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.31□□□□□ -1.56
RFXAPO00287 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.31□□□□□ -1.56
RFXAPO00287 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.31□□□□□ -1.56
RFXAPO00287 MAL2-203ENST00000534619 578 ntTSL 4 BASIC5.31□□□□□ -1.56
RFXAPO00287 PDCD5P1-201ENST00000543528 309 ntBASIC5.31□□□□□ -1.56
RFXAPO00287 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.31□□□□□ -1.56
RFXAPO00287 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
RFXAPO00287 AC106785.1-201ENST00000565935 262 ntBASIC5.31□□□□□ -1.56
RFXAPO00287 AC019322.1-201ENST00000571869 389 ntBASIC5.31□□□□□ -1.56
RFXAPO00287 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RFXAPO00287 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.31□□□□□ -1.56
RFXAPO00287 VN1R107P-201ENST00000601784 209 ntBASIC5.31□□□□□ -1.56
RFXAPO00287 AC006006.1-201ENST00000603082 144 ntBASIC5.31□□□□□ -1.56
RFXAPO00287 AC012507.3-201ENST00000603556 477 ntBASIC5.31□□□□□ -1.56
RFXAPO00287 AC005332.6-201ENST00000613178 446 ntBASIC5.31□□□□□ -1.56
RFXAPO00287 AC068722.2-201ENST00000618734 544 ntBASIC5.31□□□□□ -1.56
RFXAPO00287 AC024940.5-201ENST00000622889 474 ntBASIC5.31□□□□□ -1.56
RFXAPO00287 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RFXAPO00287 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFXAPO00287 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.31□□□□□ -1.56
RFXAPO00287 CDR1-202ENST00000625883 1485 ntBASIC5.31□□□□□ -1.56
RFXAPO00287 MTND5P16-201ENST00000460269 1703 ntBASIC5.31□□□□□ -1.56
RFXAPO00287 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.31□□□□□ -1.56
RFXAPO00287 AC009962.1-201ENST00000567327 3813 ntBASIC5.31□□□□□ -1.56
RFXAPO00287 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.31□□□□□ -1.56
RFXAPO00287 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
RFXAPO00287 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFXAPO00287 AL355488.2-201ENST00000609909 2850 ntBASIC5.3□□□□□ -1.56
RFXAPO00287 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RFXAPO00287 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.3□□□□□ -1.56
RFXAPO00287 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.3□□□□□ -1.56
RFXAPO00287 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFXAPO00287 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.3□□□□□ -1.56
RFXAPO00287 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFXAPO00287 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFXAPO00287 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFXAPO00287 OR5J1P-201ENST00000313544 939 ntBASIC5.3□□□□□ -1.56
RFXAPO00287 OR4A15-201ENST00000314706 1035 ntBASIC5.3□□□□□ -1.56
RFXAPO00287 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.3□□□□□ -1.56
RFXAPO00287 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFXAPO00287 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFXAPO00287 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RFXAPO00287 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RFXAPO00287 RNU1-74P-201ENST00000384108 171 ntBASIC5.3□□□□□ -1.56
RFXAPO00287 Y_RNA.459-201ENST00000384251 102 ntBASIC5.3□□□□□ -1.56
RFXAPO00287 MIR129-1-201ENST00000384972 72 ntBASIC5.3□□□□□ -1.56
RFXAPO00287 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RFXAPO00287 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.3□□□□□ -1.56
RFXAPO00287 AL390316.1-201ENST00000406279 553 ntBASIC5.3□□□□□ -1.56
RFXAPO00287 Y_RNA.608-201ENST00000410647 95 ntBASIC5.3□□□□□ -1.56
RFXAPO00287 RNU6-1148P-201ENST00000410992 104 ntBASIC5.3□□□□□ -1.56
RFXAPO00287 NUP35P1-201ENST00000422734 947 ntBASIC5.3□□□□□ -1.56
RFXAPO00287 AP001324.1-201ENST00000428553 399 ntBASIC5.3□□□□□ -1.56
RFXAPO00287 AL513175.1-201ENST00000431492 780 ntBASIC5.3□□□□□ -1.56
RFXAPO00287 AL365400.1-201ENST00000431854 640 ntBASIC5.3□□□□□ -1.56
RFXAPO00287 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.3□□□□□ -1.56
RFXAPO00287 LINC02210-201ENST00000444561 288 ntBASIC5.3□□□□□ -1.56
RFXAPO00287 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC5.3□□□□□ -1.56
RFXAPO00287 RPL7P19-201ENST00000469948 618 ntBASIC5.3□□□□□ -1.56
RFXAPO00287 AC109327.1-201ENST00000471666 403 ntBASIC5.3□□□□□ -1.56
RFXAPO00287 MTND1P3-201ENST00000484956 952 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms