Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 AP001636.2-201ENST00000525517 696 ntBASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 NPM1P35-201ENST00000533043 868 ntBASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 CR383656.14-201ENST00000551951 406 ntBASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 CBX3P2-202ENST00000583365 535 ntBASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC007687.1-201ENST00000602704 304 ntBASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC084373.1-201ENST00000603311 235 ntBASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 AC006254.3-201ENST00000603353 884 ntBASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL096803.3-201ENST00000609032 532 ntBASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 U4.6-201ENST00000621618 127 ntBASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 FRG1DP-201ENST00000635586 771 ntBASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
TMX2-CTNND1H3BSU7 AL356274.2-201ENST00000624379 3752 ntBASIC3.34□□□□□ -1.88
TMX2-CTNND1H3BSU7 SAGE2P-201ENST00000420011 2126 ntBASIC3.34□□□□□ -1.88
TMX2-CTNND1H3BSU7 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.34□□□□□ -1.88
TMX2-CTNND1H3BSU7 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC119744.1-201ENST00000454746 1715 ntBASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC007656.2-201ENST00000624902 4547 ntBASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 MTCO3P31-201ENST00000405526 789 ntBASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 RNA5SP31-201ENST00000411144 127 ntBASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 AL024507.1-201ENST00000412741 274 ntBASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 AL158825.1-201ENST00000414735 521 ntBASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC092832.1-201ENST00000422934 400 ntBASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 SDCBPP2-201ENST00000424643 885 ntBASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC006989.1-201ENST00000427212 131 ntBASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC005300.1-201ENST00000428401 373 ntBASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 AL512649.1-201ENST00000428997 581 ntBASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 AL512661.1-201ENST00000434586 1253 ntBASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 RNFT1P2-201ENST00000443064 757 ntBASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 RPL9P32-201ENST00000464118 620 ntBASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC078857.1-201ENST00000469870 667 ntBASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC012170.1-201ENST00000495139 359 ntBASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC025459.1-201ENST00000504072 156 ntBASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 PHBP14-201ENST00000512887 367 ntBASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC108120.2-201ENST00000512973 294 ntBASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 MIR5680-201ENST00000577577 84 ntBASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC012493.2-201ENST00000595083 291 ntBASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC015849.2-201ENST00000605738 409 ntBASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
TMX2-CTNND1H3BSU7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC091152.2-201ENST00000591628 2569 ntBASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 FRG1CP-201ENST00000358464 769 ntBASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 TAF9BP2-201ENST00000400856 499 ntBASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 RN7SKP53-201ENST00000411337 315 ntBASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 OR4K6P-201ENST00000416478 897 ntBASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 RPS27P29-201ENST00000463110 252 ntBASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC107398.1-201ENST00000486904 505 ntBASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC010285.3-201ENST00000511668 676 ntBASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 IGKV2-26-201ENST00000518305 343 ntBASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 MIR4458-201ENST00000578872 75 ntBASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 AC011492.1-201ENST00000600023 315 ntBASIC3.32□□□□□ -1.88
TMX2-CTNND1H3BSU7 AP001033.2-201ENST00000609701 1003 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms