Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC233702.7-202ENST00000582941 211 ntBASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 GLYATL1P2-202ENST00000588046 902 ntBASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 AC020910.3-201ENST00000603701 874 ntBASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 AC018462.2-201ENST00000605375 395 ntBASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 RPSAP75-201ENST00000605848 301 ntBASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 AC073488.6-201ENST00000632293 754 ntBASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 ZNF33CP-201ENST00000432492 2030 ntBASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 AC011978.2-201ENST00000569835 2054 ntBASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 NRK-204ENST00000540278 1687 ntTSL 2 BASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 Y_RNA.389-201ENST00000383924 113 ntBASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 RNU6-128P-201ENST00000383976 107 ntBASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 AL049697.2-201ENST00000403708 294 ntBASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 U3.43-201ENST00000410734 213 ntBASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 AL035422.1-201ENST00000414193 397 ntBASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 AL139095.3-201ENST00000419672 1203 ntBASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 BX284632.2-201ENST00000421091 399 ntBASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 CALM2P2-201ENST00000428512 440 ntBASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 RPL21P112-201ENST00000434403 463 ntBASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 MTND2P29-201ENST00000438595 412 ntBASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 AL359955.2-201ENST00000445380 353 ntBASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 RN7SL165P-201ENST00000477476 291 ntBASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 UBA52P7-201ENST00000486088 380 ntBASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 AC010343.2-201ENST00000510162 224 ntBASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 RNA5SP116-201ENST00000516132 98 ntBASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 MIR3941-201ENST00000582572 103 ntBASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 AL031320.1-201ENST00000604177 357 ntBASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
PCDHB11Q9Y5F2 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PCDHB11Q9Y5F2 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PCDHB11Q9Y5F2 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.15□□□□□ -1.43
PCDHB11Q9Y5F2 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
PCDHB11Q9Y5F2 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.43
PCDHB11Q9Y5F2 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PCDHB11Q9Y5F2 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.15□□□□□ -1.43
PCDHB11Q9Y5F2 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PCDHB11Q9Y5F2 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PCDHB11Q9Y5F2 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 Y_RNA.428-201ENST00000384078 102 ntBASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 AC116036.1-201ENST00000412199 367 ntBASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 RPSAP65-201ENST00000429660 595 ntBASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 AC236972.1-201ENST00000433225 199 ntBASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 RPS17P13-201ENST00000448974 407 ntBASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 AL354710.1-201ENST00000453641 246 ntBASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 AC103987.1-201ENST00000473394 348 ntBASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 AP002812.1-201ENST00000495378 474 ntBASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 IGKV1OR2-1-201ENST00000514060 354 ntBASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 RNU6-685P-201ENST00000517088 95 ntBASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 SNORD116.3-201ENST00000517176 78 ntBASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 RNU1-54P-201ENST00000517181 120 ntBASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 EIF4A2P5-201ENST00000529914 499 ntBASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 RANP3-201ENST00000530970 276 ntBASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 AC092470.1-201ENST00000546187 132 ntBASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 AL121576.1-201ENST00000556055 276 ntBASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 AC009120.3-201ENST00000563335 499 ntBASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 AC106782.4-201ENST00000568264 210 ntBASIC6.14□□□□□ -1.43
PCDHB11Q9Y5F2 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms