Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 PRELID3BP6-201ENST00000503839 571 ntBASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 AC119751.4-201ENST00000507498 357 ntBASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 AC048346.1-201ENST00000510247 144 ntBASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 NPM1P41-201ENST00000512920 831 ntBASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 MTATP6P9-201ENST00000515039 680 ntBASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 RNU6-352P-201ENST00000516908 107 ntBASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 AC010376.1-201ENST00000522101 334 ntBASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 OR8I1P-201ENST00000529291 931 ntBASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 OR4A45P-201ENST00000529954 901 ntBASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 AC044913.1-201ENST00000557200 430 ntBASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 AC006270.2-201ENST00000578523 652 ntBASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 AC244505.7-201ENST00000599675 272 ntBASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 AC096947.1-201ENST00000603233 470 ntBASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 AL009028.1-201ENST00000604895 802 ntBASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 AL583856.2-201ENST00000606298 543 ntBASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 AL354760.1-201ENST00000608357 643 ntBASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 AL161637.1-201ENST00000622380 412 ntBASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 AC117529.2-201ENST00000512159 2068 ntBASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 AL645568.2-201ENST00000432815 1337 ntBASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 MTND4P10-201ENST00000446199 1363 ntBASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 AL359893.1-201ENST00000447628 1580 ntBASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 RNU6-115P-201ENST00000364310 107 ntBASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 RNU6-921P-201ENST00000384361 107 ntBASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 RPL32P23-201ENST00000397237 405 ntBASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 AL139098.1-201ENST00000407291 389 ntBASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 SNORA11-201ENST00000408789 128 ntBASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 RNU6-575P-201ENST00000411326 105 ntBASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 USP9YP21-201ENST00000420603 432 ntBASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 CDC27P1-201ENST00000445384 715 ntBASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 AL500522.2-201ENST00000448562 343 ntBASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 SNRPGP5-201ENST00000456003 220 ntBASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 MTND4LP31-201ENST00000514859 294 ntBASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 RNU6-1028P-201ENST00000517164 93 ntBASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 IGKV2D-23-201ENST00000518179 286 ntBASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 IGHV3-32-201ENST00000519182 355 ntBASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 AC122134.1-202ENST00000569111 1201 ntBASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 OR4G1P-201ENST00000588632 938 ntBASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 AL451086.1-201ENST00000605596 223 ntBASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 HSPE1P14-201ENST00000605812 302 ntBASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 AC144521.1-201ENST00000607148 956 ntBASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 AC090912.3-201ENST00000609775 533 ntBASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 AC006213.4-201ENST00000616184 634 ntBASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 AL512506.2-201ENST00000624472 458 ntBASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 AC010608.3-201ENST00000625048 527 ntBASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 AF001550.2-201ENST00000636643 217 ntBASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 AC099654.9-201ENST00000637055 678 ntBASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 AL353746.1-201ENST00000566293 6881 ntBASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 AC106871.1-201ENST00000568324 3102 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms