Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 TMSB10P2-201ENST00000416049 131 ntBASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 AC062016.2-201ENST00000420950 676 ntBASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 MTCO2P34-201ENST00000421994 607 ntBASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 RPL7P57-201ENST00000423238 740 ntBASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 RPS27AP12-201ENST00000429552 465 ntBASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 PPIAP13-201ENST00000434706 478 ntBASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 ELOCP10-201ENST00000440624 327 ntBASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 MTCO1P19-201ENST00000443487 500 ntBASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 PHBP16-201ENST00000446318 950 ntBASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 AC104651.2-201ENST00000447549 528 ntBASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 RPL36AP33-201ENST00000450395 310 ntBASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 EIF4A1P11-201ENST00000451239 222 ntBASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 KATNBL1P6-201ENST00000453433 915 ntBASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 AC005912.1-201ENST00000495392 255 ntBASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 AF279873.1-201ENST00000523393 313 ntBASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 TRAV15-201ENST00000556680 249 ntBASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 AL512347.1-201ENST00000566420 503 ntBASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 AC074051.3-201ENST00000570238 358 ntBASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 AC123786.2-201ENST00000603459 275 ntBASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 ELOCP34-201ENST00000604436 327 ntBASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 AC090948.2-201ENST00000607363 564 ntBASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 AC243654.2-201ENST00000612843 443 ntBASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 AC092650.2-201ENST00000619984 902 ntBASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSX2IPQ9Y2D8 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
SSX2IPQ9Y2D8 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SSX2IPQ9Y2D8 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SSX2IPQ9Y2D8 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SSX2IPQ9Y2D8 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 AC090017.1-201ENST00000548612 1779 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 Y_RNA.25-201ENST00000362528 102 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 RNU6-115P-201ENST00000364310 107 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 SNORA57.1-201ENST00000391227 145 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 RPS26P8-201ENST00000393490 348 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 ATP5F1P4-201ENST00000397288 746 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 RN7SKP142-201ENST00000411236 328 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 AL663109.1-201ENST00000411498 844 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 USP9YP33-201ENST00000412220 421 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 PDSS1P1-201ENST00000422953 1114 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 PRELID3BP10-201ENST00000431957 584 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 RPS26P40-201ENST00000435209 294 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 USP9YP35-201ENST00000435696 412 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 AC241584.1-201ENST00000438469 1241 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 NUTF2P3-201ENST00000448540 384 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 NF1P3-201ENST00000457709 450 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 RPL21P71-201ENST00000465598 459 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 AC007537.2-201ENST00000472093 511 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 AC010625.1-201ENST00000511296 403 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 AC027309.2-201ENST00000520566 192 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 MIR3611-201ENST00000584484 83 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 AC011477.5-201ENST00000586571 259 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 AC008507.1-201ENST00000587506 734 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 AC115085.1-201ENST00000588924 229 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 AC078795.2-201ENST00000602835 1252 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 AC004492.1-201ENST00000607036 742 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 AL354760.1-201ENST00000608357 643 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SSX2IPQ9Y2D8 AL359740.1-201ENST00000624340 592 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms