Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 RNA5SP399-201ENST00000364003 117 ntBASIC3.55□□□□□ -1.84
RNF6Q9Y252 SNORA73.2-201ENST00000364946 201 ntBASIC3.55□□□□□ -1.84
RNF6Q9Y252 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
RNF6Q9Y252 RNU6-761P-201ENST00000384148 107 ntBASIC3.55□□□□□ -1.84
RNF6Q9Y252 MIR7-3-201ENST00000384898 110 ntBASIC3.55□□□□□ -1.84
RNF6Q9Y252 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
RNF6Q9Y252 SSXP10-201ENST00000402595 565 ntBASIC3.55□□□□□ -1.84
RNF6Q9Y252 AL391417.1-201ENST00000404100 426 ntBASIC3.55□□□□□ -1.84
RNF6Q9Y252 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.55□□□□□ -1.84
RNF6Q9Y252 AC092638.1-201ENST00000411966 1275 ntBASIC3.55□□□□□ -1.84
RNF6Q9Y252 MTND4P22-201ENST00000413116 1169 ntBASIC3.55□□□□□ -1.84
RNF6Q9Y252 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.55□□□□□ -1.84
RNF6Q9Y252 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.55□□□□□ -1.84
RNF6Q9Y252 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RNF6Q9Y252 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.55□□□□□ -1.84
RNF6Q9Y252 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.55□□□□□ -1.84
RNF6Q9Y252 AL592437.1-201ENST00000443781 492 ntBASIC3.55□□□□□ -1.84
RNF6Q9Y252 RPS29P31-201ENST00000446147 164 ntBASIC3.55□□□□□ -1.84
RNF6Q9Y252 SNRPGP5-201ENST00000456003 220 ntBASIC3.55□□□□□ -1.84
RNF6Q9Y252 AC004801.2-202ENST00000463559 283 ntBASIC3.55□□□□□ -1.84
RNF6Q9Y252 AC015908.1-201ENST00000478739 476 ntBASIC3.55□□□□□ -1.84
RNF6Q9Y252 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.55□□□□□ -1.84
RNF6Q9Y252 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.55□□□□□ -1.84
RNF6Q9Y252 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.55□□□□□ -1.84
RNF6Q9Y252 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.55□□□□□ -1.84
RNF6Q9Y252 FTH1P9-201ENST00000513251 355 ntBASIC3.55□□□□□ -1.84
RNF6Q9Y252 AP001207.1-201ENST00000524051 481 ntBASIC3.55□□□□□ -1.84
RNF6Q9Y252 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.55□□□□□ -1.84
RNF6Q9Y252 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.55□□□□□ -1.84
RNF6Q9Y252 AC002487.1-201ENST00000604565 994 ntBASIC3.55□□□□□ -1.84
RNF6Q9Y252 AC069200.1-201ENST00000609511 323 ntBASIC3.55□□□□□ -1.84
RNF6Q9Y252 AC092574.1-201ENST00000609771 420 ntBASIC3.55□□□□□ -1.84
RNF6Q9Y252 AC006249.1-201ENST00000621223 471 ntBASIC3.55□□□□□ -1.84
RNF6Q9Y252 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RNF6Q9Y252 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RNF6Q9Y252 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RNF6Q9Y252 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.54□□□□□ -1.84
RNF6Q9Y252 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.54□□□□□ -1.84
RNF6Q9Y252 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RNF6Q9Y252 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
RNF6Q9Y252 AC007685.1-201ENST00000329806 452 ntBASIC3.54□□□□□ -1.84
RNF6Q9Y252 SNORA63.1-201ENST00000362493 131 ntBASIC3.54□□□□□ -1.84
RNF6Q9Y252 Y_RNA.333-201ENST00000365274 102 ntBASIC3.54□□□□□ -1.84
RNF6Q9Y252 RNA5SP167-201ENST00000365461 116 ntBASIC3.54□□□□□ -1.84
RNF6Q9Y252 MIR16-1-201ENST00000385271 89 ntBASIC3.54□□□□□ -1.84
RNF6Q9Y252 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RNF6Q9Y252 AL159169.1-201ENST00000421119 127 ntBASIC3.54□□□□□ -1.84
RNF6Q9Y252 AC005517.2-201ENST00000424673 553 ntBASIC3.54□□□□□ -1.84
RNF6Q9Y252 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.54□□□□□ -1.84
RNF6Q9Y252 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.54□□□□□ -1.84
RNF6Q9Y252 SEPT14P24-201ENST00000447236 180 ntBASIC3.54□□□□□ -1.84
RNF6Q9Y252 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.54□□□□□ -1.84
RNF6Q9Y252 HMGN3P1-201ENST00000453847 193 ntBASIC3.54□□□□□ -1.84
RNF6Q9Y252 PPIAP15-201ENST00000479662 484 ntBASIC3.54□□□□□ -1.84
RNF6Q9Y252 AC005726.1-201ENST00000494679 427 ntBASIC3.54□□□□□ -1.84
RNF6Q9Y252 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.54□□□□□ -1.84
RNF6Q9Y252 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.54□□□□□ -1.84
RNF6Q9Y252 SNORA70.14-201ENST00000516205 110 ntBASIC3.54□□□□□ -1.84
RNF6Q9Y252 RNA5SP179-201ENST00000517284 121 ntBASIC3.54□□□□□ -1.84
RNF6Q9Y252 SUMO2P20-201ENST00000520803 283 ntBASIC3.54□□□□□ -1.84
RNF6Q9Y252 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.54□□□□□ -1.84
RNF6Q9Y252 AC087894.1-201ENST00000538359 518 ntBASIC3.54□□□□□ -1.84
RNF6Q9Y252 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.54□□□□□ -1.84
RNF6Q9Y252 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.54□□□□□ -1.84
RNF6Q9Y252 AC010735.1-201ENST00000567305 1026 ntBASIC3.54□□□□□ -1.84
RNF6Q9Y252 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.54□□□□□ -1.84
RNF6Q9Y252 OR4G1P-201ENST00000588632 938 ntBASIC3.54□□□□□ -1.84
RNF6Q9Y252 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.54□□□□□ -1.84
RNF6Q9Y252 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.54□□□□□ -1.84
RNF6Q9Y252 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.54□□□□□ -1.84
RNF6Q9Y252 AC091167.4-201ENST00000605079 184 ntBASIC3.54□□□□□ -1.84
RNF6Q9Y252 AL592295.2-201ENST00000612578 206 ntBASIC3.54□□□□□ -1.84
RNF6Q9Y252 U73479.1-201ENST00000618062 168 ntBASIC3.54□□□□□ -1.84
RNF6Q9Y252 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.54□□□□□ -1.84
RNF6Q9Y252 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RNF6Q9Y252 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
RNF6Q9Y252 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.54□□□□□ -1.84
RNF6Q9Y252 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.54□□□□□ -1.84
RNF6Q9Y252 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RNF6Q9Y252 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RNF6Q9Y252 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.54□□□□□ -1.84
RNF6Q9Y252 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.53□□□□□ -1.84
RNF6Q9Y252 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
RNF6Q9Y252 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.84
RNF6Q9Y252 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.53□□□□□ -1.84
RNF6Q9Y252 EXOC5P1-201ENST00000510543 1969 ntBASIC3.53□□□□□ -1.84
RNF6Q9Y252 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
RNF6Q9Y252 RNU6-1226P-201ENST00000384317 107 ntBASIC3.53□□□□□ -1.84
RNF6Q9Y252 RNU6-441P-201ENST00000384545 106 ntBASIC3.53□□□□□ -1.84
RNF6Q9Y252 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.53□□□□□ -1.84
RNF6Q9Y252 AL603865.2-201ENST00000401679 213 ntBASIC3.53□□□□□ -1.84
RNF6Q9Y252 MIR1250-201ENST00000408098 113 ntBASIC3.53□□□□□ -1.84
RNF6Q9Y252 AC093578.1-201ENST00000415219 368 ntBASIC3.53□□□□□ -1.84
RNF6Q9Y252 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.53□□□□□ -1.84
RNF6Q9Y252 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.53□□□□□ -1.84
RNF6Q9Y252 RPL7P53-201ENST00000421245 739 ntBASIC3.53□□□□□ -1.84
RNF6Q9Y252 AC013262.1-201ENST00000426710 252 ntBASIC3.53□□□□□ -1.84
RNF6Q9Y252 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.53□□□□□ -1.84
RNF6Q9Y252 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.53□□□□□ -1.84
RNF6Q9Y252 Z99714.1-201ENST00000450463 807 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms