Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AL078604.1-201ENST00000404609 466 ntBASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 AC009310.1-201ENST00000414414 451 ntBASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 AC012065.2-201ENST00000421295 375 ntBASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 MTCYBP10-201ENST00000424905 650 ntBASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 YWHAZP8-201ENST00000436935 731 ntBASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 AC107399.1-201ENST00000451226 265 ntBASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 RN7SL738P-201ENST00000470264 297 ntBASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 RPL5P22-201ENST00000480199 884 ntBASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 HSPD1P15-201ENST00000505573 1122 ntBASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 RN7SKP67-201ENST00000515905 235 ntBASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 RNU4ATAC8P-201ENST00000516196 109 ntBASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 AC234771.5-201ENST00000600161 514 ntBASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 AC005014.2-201ENST00000607795 599 ntBASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 AC011493.1-201ENST00000596753 1632 ntBASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ZC3H4Q9UPT8 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 PWAR1-201ENST00000624188 2414 ntBASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 OR1S2-201ENST00000302592 978 ntBASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 RNU1-74P-201ENST00000384108 171 ntBASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 RNA5SP87-201ENST00000384155 118 ntBASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 Y_RNA.452-201ENST00000384202 108 ntBASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 AL023807.1-201ENST00000407932 359 ntBASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 AC093162.1-201ENST00000419682 124 ntBASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 AL360081.1-201ENST00000428299 555 ntBASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 RPS3AP52-201ENST00000435639 297 ntBASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 RPL32P28-201ENST00000443577 397 ntBASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 AC005297.2-201ENST00000450430 606 ntBASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 RPL10P17-201ENST00000453852 316 ntBASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 RPS29P33-201ENST00000456717 146 ntBASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 AC092324.1-201ENST00000468671 324 ntBASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 AC128716.1-201ENST00000475129 166 ntBASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 RPL23AP41-201ENST00000484754 458 ntBASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 FAM206BP-201ENST00000510179 541 ntBASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 RNU6-794P-201ENST00000517261 64 ntBASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 AP003122.3-201ENST00000526316 255 ntBASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 PTP4A1P6-201ENST00000531034 478 ntBASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 OR5B10P-201ENST00000532869 642 ntBASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 MIR3146-201ENST00000580367 79 ntBASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 AC090607.5-201ENST00000615692 224 ntBASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 uc_338.22-201ENST00000622722 187 ntBASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.9□□□□□ -1.3
ZC3H4Q9UPT8 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
ZC3H4Q9UPT8 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
ZC3H4Q9UPT8 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
ZC3H4Q9UPT8 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
ZC3H4Q9UPT8 THAP12P9-201ENST00000503971 2360 ntBASIC6.9□□□□□ -1.31
ZC3H4Q9UPT8 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
ZC3H4Q9UPT8 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
ZC3H4Q9UPT8 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
ZC3H4Q9UPT8 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ZC3H4Q9UPT8 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ZC3H4Q9UPT8 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.89□□□□□ -1.31
ZC3H4Q9UPT8 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
ZC3H4Q9UPT8 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
ZC3H4Q9UPT8 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC6.89□□□□□ -1.31
ZC3H4Q9UPT8 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
ZC3H4Q9UPT8 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
ZC3H4Q9UPT8 Y_RNA.28-201ENST00000362554 111 ntBASIC6.89□□□□□ -1.31
ZC3H4Q9UPT8 SNORD8-201ENST00000363915 110 ntBASIC6.89□□□□□ -1.31
ZC3H4Q9UPT8 RNU1-59P-201ENST00000364829 162 ntBASIC6.89□□□□□ -1.31
ZC3H4Q9UPT8 Y_RNA.367-201ENST00000365544 101 ntBASIC6.89□□□□□ -1.31
ZC3H4Q9UPT8 PRRC2CP1-201ENST00000404428 159 ntBASIC6.89□□□□□ -1.31
ZC3H4Q9UPT8 AL359634.1-202ENST00000404721 284 ntBASIC6.89□□□□□ -1.31
ZC3H4Q9UPT8 AL606923.1-201ENST00000406616 190 ntBASIC6.89□□□□□ -1.31
ZC3H4Q9UPT8 GSTM3P2-201ENST00000412746 530 ntBASIC6.89□□□□□ -1.31
ZC3H4Q9UPT8 RPL6P29-201ENST00000414863 865 ntBASIC6.89□□□□□ -1.31
ZC3H4Q9UPT8 AC009302.1-201ENST00000417147 390 ntBASIC6.89□□□□□ -1.31
ZC3H4Q9UPT8 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms