Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 RPS27P23-201ENST00000487608 251 ntBASIC4.2□□□□□ -1.74
SIX4Q9UIU6 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 SCARNA14-201ENST00000516903 136 ntBASIC4.2□□□□□ -1.74
SIX4Q9UIU6 RN7SKP283-201ENST00000517197 270 ntBASIC4.2□□□□□ -1.74
SIX4Q9UIU6 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 AP001317.1-201ENST00000531194 960 ntBASIC4.2□□□□□ -1.74
SIX4Q9UIU6 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 AL109618.2-201ENST00000605527 211 ntBASIC4.2□□□□□ -1.74
SIX4Q9UIU6 AL451074.6-201ENST00000608512 729 ntBASIC4.2□□□□□ -1.74
SIX4Q9UIU6 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 AL354798.1-201ENST00000622505 329 ntBASIC4.2□□□□□ -1.74
SIX4Q9UIU6 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SIX4Q9UIU6 AC046144.1-201ENST00000478559 1853 ntBASIC4.2□□□□□ -1.74
SIX4Q9UIU6 AC109315.1-201ENST00000584143 1347 ntBASIC4.2□□□□□ -1.74
SIX4Q9UIU6 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 AC018529.3-201ENST00000624212 2254 ntBASIC4.19□□□□□ -1.74
SIX4Q9UIU6 AC119744.1-201ENST00000454746 1715 ntBASIC4.19□□□□□ -1.74
SIX4Q9UIU6 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 OR10J6P-201ENST00000289731 930 ntBASIC4.19□□□□□ -1.74
SIX4Q9UIU6 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 Y_RNA.408-201ENST00000383987 102 ntBASIC4.19□□□□□ -1.74
SIX4Q9UIU6 MIR93-201ENST00000385024 80 ntBASIC4.19□□□□□ -1.74
SIX4Q9UIU6 RPL32P23-201ENST00000397237 405 ntBASIC4.19□□□□□ -1.74
SIX4Q9UIU6 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 AL161449.1-201ENST00000414531 1199 ntBASIC4.19□□□□□ -1.74
SIX4Q9UIU6 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 USP9YP31-201ENST00000431405 881 ntBASIC4.19□□□□□ -1.74
SIX4Q9UIU6 VN1R108P-201ENST00000431580 830 ntBASIC4.19□□□□□ -1.74
SIX4Q9UIU6 AC005345.1-201ENST00000431868 217 ntBASIC4.19□□□□□ -1.74
SIX4Q9UIU6 ATP5F1P1-201ENST00000433775 569 ntBASIC4.19□□□□□ -1.74
SIX4Q9UIU6 SEPT7P5-201ENST00000434048 306 ntBASIC4.19□□□□□ -1.74
SIX4Q9UIU6 KCTD9P3-201ENST00000434597 1169 ntBASIC4.19□□□□□ -1.74
SIX4Q9UIU6 USP9YP22-201ENST00000438971 294 ntBASIC4.19□□□□□ -1.74
SIX4Q9UIU6 AC093155.1-201ENST00000440164 826 ntBASIC4.19□□□□□ -1.74
SIX4Q9UIU6 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.19□□□□□ -1.74
SIX4Q9UIU6 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 AC108734.3-201ENST00000481241 1165 ntBASIC4.19□□□□□ -1.74
SIX4Q9UIU6 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 NPM1P41-201ENST00000512920 831 ntBASIC4.19□□□□□ -1.74
SIX4Q9UIU6 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 RNA5SP154-201ENST00000516193 111 ntBASIC4.19□□□□□ -1.74
SIX4Q9UIU6 RNU6-347P-201ENST00000516658 105 ntBASIC4.19□□□□□ -1.74
SIX4Q9UIU6 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 ELOCP32-201ENST00000548625 324 ntBASIC4.19□□□□□ -1.74
SIX4Q9UIU6 AC084757.1-201ENST00000559987 490 ntBASIC4.19□□□□□ -1.74
SIX4Q9UIU6 AC135628.1-201ENST00000568867 534 ntBASIC4.19□□□□□ -1.74
SIX4Q9UIU6 AP005136.1-201ENST00000579765 429 ntBASIC4.19□□□□□ -1.74
SIX4Q9UIU6 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 BNIP3P26-201ENST00000600827 554 ntBASIC4.19□□□□□ -1.74
SIX4Q9UIU6 AP004247.3-201ENST00000608682 624 ntBASIC4.19□□□□□ -1.74
SIX4Q9UIU6 AC009090.3-201ENST00000616553 565 ntBASIC4.19□□□□□ -1.74
SIX4Q9UIU6 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 AL049737.1-201ENST00000413920 1403 ntBASIC4.19□□□□□ -1.74
SIX4Q9UIU6 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SIX4Q9UIU6 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
SIX4Q9UIU6 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.18□□□□□ -1.74
SIX4Q9UIU6 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.18□□□□□ -1.74
SIX4Q9UIU6 AP000526.1-201ENST00000603308 1388 ntBASIC4.18□□□□□ -1.74
SIX4Q9UIU6 AC096656.1-201ENST00000623826 1364 ntBASIC4.18□□□□□ -1.74
SIX4Q9UIU6 U1.1-201ENST00000384101 164 ntBASIC4.18□□□□□ -1.74
SIX4Q9UIU6 MIR217-201ENST00000384817 110 ntBASIC4.18□□□□□ -1.74
SIX4Q9UIU6 MIR199A2-201ENST00000385289 110 ntBASIC4.18□□□□□ -1.74
SIX4Q9UIU6 MIR708-201ENST00000390708 88 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms