Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
UPF3BQ9BZI7 AC240504.1-201ENST00000395709 845 ntBASIC3.86□□□□□ -1.79
UPF3BQ9BZI7 AC245291.1-201ENST00000419501 328 ntBASIC3.86□□□□□ -1.79
UPF3BQ9BZI7 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.86□□□□□ -1.79
UPF3BQ9BZI7 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.86□□□□□ -1.79
UPF3BQ9BZI7 RNF19BPX-201ENST00000426224 625 ntBASIC3.86□□□□□ -1.79
UPF3BQ9BZI7 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.86□□□□□ -1.79
UPF3BQ9BZI7 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.86□□□□□ -1.79
UPF3BQ9BZI7 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.86□□□□□ -1.79
UPF3BQ9BZI7 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.86□□□□□ -1.79
UPF3BQ9BZI7 AC006518.1-201ENST00000541449 943 ntBASIC3.86□□□□□ -1.79
UPF3BQ9BZI7 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.86□□□□□ -1.79
UPF3BQ9BZI7 AC011816.2-201ENST00000607089 556 ntBASIC3.86□□□□□ -1.79
UPF3BQ9BZI7 AC091903.1-201ENST00000624322 454 ntBASIC3.86□□□□□ -1.79
UPF3BQ9BZI7 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UPF3BQ9BZI7 AC073476.4-201ENST00000628409 72 ntBASIC3.86□□□□□ -1.79
UPF3BQ9BZI7 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UPF3BQ9BZI7 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
UPF3BQ9BZI7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
UPF3BQ9BZI7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.86□□□□□ -1.79
UPF3BQ9BZI7 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
UPF3BQ9BZI7 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 AL353743.1-202ENST00000431724 1695 ntBASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 RNF6P1-201ENST00000444889 1784 ntBASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 AC000367.1-201ENST00000452711 1766 ntBASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 ARF4P3-201ENST00000397387 509 ntBASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 HMGN1P24-201ENST00000412282 298 ntBASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 MTCYBP31-201ENST00000438855 1122 ntBASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 Z99127.3-201ENST00000448158 395 ntBASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 AL035404.1-201ENST00000497982 568 ntBASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 AC021146.5-201ENST00000503544 545 ntBASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 SNX5P1-201ENST00000505757 1041 ntBASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 HIGD1AP10-201ENST00000527837 282 ntBASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 EIF4BP1-201ENST00000554881 351 ntBASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 AP001180.3-201ENST00000582221 145 ntBASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 AL450489.1-201ENST00000612071 468 ntBASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 ELL2P4-201ENST00000446870 1376 ntBASIC3.85□□□□□ -1.79
UPF3BQ9BZI7 AL133383.2-201ENST00000622958 2336 ntBASIC3.84□□□□□ -1.79
UPF3BQ9BZI7 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
UPF3BQ9BZI7 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.84□□□□□ -1.79
UPF3BQ9BZI7 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.84□□□□□ -1.79
UPF3BQ9BZI7 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
UPF3BQ9BZI7 RNU6-805P-201ENST00000365643 106 ntBASIC3.84□□□□□ -1.79
UPF3BQ9BZI7 RNU6-301P-201ENST00000384277 107 ntBASIC3.84□□□□□ -1.79
UPF3BQ9BZI7 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.84□□□□□ -1.79
UPF3BQ9BZI7 AC007390.1-201ENST00000415722 356 ntBASIC3.84□□□□□ -1.79
UPF3BQ9BZI7 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.84□□□□□ -1.79
UPF3BQ9BZI7 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.84□□□□□ -1.79
UPF3BQ9BZI7 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.84□□□□□ -1.79
UPF3BQ9BZI7 AC005300.1-201ENST00000428401 373 ntBASIC3.84□□□□□ -1.79
UPF3BQ9BZI7 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.84□□□□□ -1.79
UPF3BQ9BZI7 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.84□□□□□ -1.79
UPF3BQ9BZI7 TVP23BP2-201ENST00000455082 615 ntBASIC3.84□□□□□ -1.79
UPF3BQ9BZI7 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.84□□□□□ -1.79
UPF3BQ9BZI7 SNORD108-201ENST00000459332 71 ntBASIC3.84□□□□□ -1.79
UPF3BQ9BZI7 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.84□□□□□ -1.79
UPF3BQ9BZI7 AC012170.1-201ENST00000495139 359 ntBASIC3.84□□□□□ -1.79
UPF3BQ9BZI7 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.84□□□□□ -1.79
UPF3BQ9BZI7 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.84□□□□□ -1.79
UPF3BQ9BZI7 MTCO2P22-201ENST00000603246 681 ntBASIC3.84□□□□□ -1.79
UPF3BQ9BZI7 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.84□□□□□ -1.79
UPF3BQ9BZI7 AL590240.3-201ENST00000621416 943 ntBASIC3.84□□□□□ -1.79
UPF3BQ9BZI7 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
UPF3BQ9BZI7 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
UPF3BQ9BZI7 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.84□□□□□ -1.8
UPF3BQ9BZI7 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
UPF3BQ9BZI7 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 RPL23AP57-201ENST00000332361 466 ntBASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 RNU6-7-201ENST00000364784 107 ntBASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 RNU6-8-201ENST00000365467 107 ntBASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 RPL23AP22-201ENST00000437556 453 ntBASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 AC006028.1-201ENST00000438379 402 ntBASIC3.83□□□□□ -1.8
UPF3BQ9BZI7 AC125238.1-201ENST00000448842 249 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms