Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AL391156.1-201ENST00000554965 554 ntBASIC5.31□□□□□ -1.56
CHMP4AQ9BY43 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.31□□□□□ -1.56
CHMP4AQ9BY43 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.31□□□□□ -1.56
CHMP4AQ9BY43 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.31□□□□□ -1.56
CHMP4AQ9BY43 AC104072.1-201ENST00000568817 668 ntBASIC5.31□□□□□ -1.56
CHMP4AQ9BY43 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.31□□□□□ -1.56
CHMP4AQ9BY43 AL121834.1-201ENST00000572284 509 ntBASIC5.31□□□□□ -1.56
CHMP4AQ9BY43 MIR4474-201ENST00000579189 78 ntBASIC5.31□□□□□ -1.56
CHMP4AQ9BY43 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CHMP4AQ9BY43 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.31□□□□□ -1.56
CHMP4AQ9BY43 AL390838.2-201ENST00000602394 274 ntBASIC5.31□□□□□ -1.56
CHMP4AQ9BY43 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.31□□□□□ -1.56
CHMP4AQ9BY43 AC110741.2-201ENST00000605278 268 ntBASIC5.31□□□□□ -1.56
CHMP4AQ9BY43 MIR432-201ENST00000606207 94 ntBASIC5.31□□□□□ -1.56
CHMP4AQ9BY43 AC015813.4-201ENST00000610469 179 ntBASIC5.31□□□□□ -1.56
CHMP4AQ9BY43 AL390240.1-201ENST00000612950 384 ntBASIC5.31□□□□□ -1.56
CHMP4AQ9BY43 ZYXP1-201ENST00000617638 118 ntBASIC5.31□□□□□ -1.56
CHMP4AQ9BY43 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.31□□□□□ -1.56
CHMP4AQ9BY43 AF117829.1-206ENST00000621883 3802 ntBASIC5.31□□□□□ -1.56
CHMP4AQ9BY43 AC055839.1-201ENST00000634467 498 ntBASIC5.31□□□□□ -1.56
CHMP4AQ9BY43 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.31□□□□□ -1.56
CHMP4AQ9BY43 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CHMP4AQ9BY43 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHMP4AQ9BY43 Z99496.1-201ENST00000469424 1477 ntBASIC5.31□□□□□ -1.56
CHMP4AQ9BY43 AC024560.2-201ENST00000507981 1497 ntBASIC5.31□□□□□ -1.56
CHMP4AQ9BY43 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CHMP4AQ9BY43 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHMP4AQ9BY43 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHMP4AQ9BY43 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC5.3□□□□□ -1.56
CHMP4AQ9BY43 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CHMP4AQ9BY43 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
CHMP4AQ9BY43 RNU1-108P-201ENST00000362556 161 ntBASIC5.3□□□□□ -1.56
CHMP4AQ9BY43 MTCO1P56-201ENST00000401674 224 ntBASIC5.3□□□□□ -1.56
CHMP4AQ9BY43 MOB4-205ENST00000409916 829 ntTSL 3 BASIC5.3□□□□□ -1.56
CHMP4AQ9BY43 AL136133.1-201ENST00000413694 376 ntBASIC5.3□□□□□ -1.56
CHMP4AQ9BY43 RPL21P133-201ENST00000443666 476 ntBASIC5.3□□□□□ -1.56
CHMP4AQ9BY43 MTCYBP42-201ENST00000444653 1130 ntBASIC5.3□□□□□ -1.56
CHMP4AQ9BY43 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC5.3□□□□□ -1.56
CHMP4AQ9BY43 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.3□□□□□ -1.56
CHMP4AQ9BY43 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CHMP4AQ9BY43 PLGLA-201ENST00000465668 449 ntBASIC5.3□□□□□ -1.56
CHMP4AQ9BY43 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.3□□□□□ -1.56
CHMP4AQ9BY43 RN7SKP13-201ENST00000515933 244 ntBASIC5.3□□□□□ -1.56
CHMP4AQ9BY43 RNU6-1028P-201ENST00000517164 93 ntBASIC5.3□□□□□ -1.56
CHMP4AQ9BY43 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.3□□□□□ -1.56
CHMP4AQ9BY43 NDUFS5P6-201ENST00000529136 295 ntBASIC5.3□□□□□ -1.56
CHMP4AQ9BY43 DEFB130C-202ENST00000530001 230 ntBASIC5.3□□□□□ -1.56
CHMP4AQ9BY43 AC087897.1-201ENST00000550134 156 ntBASIC5.3□□□□□ -1.56
CHMP4AQ9BY43 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.3□□□□□ -1.56
CHMP4AQ9BY43 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.3□□□□□ -1.56
CHMP4AQ9BY43 AC068620.3-201ENST00000602749 560 ntBASIC5.3□□□□□ -1.56
CHMP4AQ9BY43 AC068724.3-201ENST00000625906 87 ntBASIC5.3□□□□□ -1.56
CHMP4AQ9BY43 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.3□□□□□ -1.56
CHMP4AQ9BY43 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CHMP4AQ9BY43 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.3□□□□□ -1.56
CHMP4AQ9BY43 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHMP4AQ9BY43 AC016588.2-201ENST00000632484 3021 ntBASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 SNORD51-201ENST00000384320 80 ntBASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 RNU1-13P-201ENST00000384499 162 ntBASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 PPIAP31-201ENST00000405422 495 ntBASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 RPL23AP74-201ENST00000437246 471 ntBASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 AP000949.1-201ENST00000438328 629 ntBASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 AC006011.1-201ENST00000442758 349 ntBASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 AL121871.1-201ENST00000443413 436 ntBASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 HMGB1P16-201ENST00000447155 540 ntBASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 RPL23AP44-201ENST00000482216 473 ntBASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 AF213884.1-201ENST00000488102 463 ntBASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 NAMPTP2-201ENST00000505629 1115 ntBASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 PPBPP1-201ENST00000510807 373 ntBASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 AC021146.1-201ENST00000511202 716 ntBASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 OR5M7P-201ENST00000526140 972 ntBASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 OR8I1P-201ENST00000529291 931 ntBASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 OR8R1P-201ENST00000543943 764 ntBASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 AL389895.1-201ENST00000554127 252 ntBASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 BNIP3P24-201ENST00000593398 557 ntBASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 AC011468.4-201ENST00000603942 409 ntBASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 AC092954.1-201ENST00000609121 445 ntBASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 MIR7151-201ENST00000617477 60 ntBASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 MIR7154-201ENST00000620673 73 ntBASIC5.29□□□□□ -1.56
CHMP4AQ9BY43 AC080188.3-201ENST00000624842 748 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms