Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 Z82195.1-201ENST00000604558 398 ntBASIC3.79□□□□□ -1.8
ABCA3Q99758 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
ABCA3Q99758 SEPT7P2-202ENST00000398921 823 ntBASIC3.78□□□□□ -1.8
ABCA3Q99758 Z98941.1-201ENST00000407764 100 ntBASIC3.78□□□□□ -1.8
ABCA3Q99758 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.78□□□□□ -1.8
ABCA3Q99758 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ABCA3Q99758 AC009263.1-201ENST00000441193 1239 ntBASIC3.78□□□□□ -1.8
ABCA3Q99758 AP001025.2-201ENST00000490908 477 ntBASIC3.78□□□□□ -1.8
ABCA3Q99758 AC108078.3-201ENST00000502633 489 ntBASIC3.78□□□□□ -1.8
ABCA3Q99758 OR5H3P-201ENST00000502817 919 ntBASIC3.78□□□□□ -1.8
ABCA3Q99758 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.78□□□□□ -1.8
ABCA3Q99758 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.78□□□□□ -1.8
ABCA3Q99758 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.78□□□□□ -1.8
ABCA3Q99758 IGKV3-31-201ENST00000523109 329 ntBASIC3.78□□□□□ -1.8
ABCA3Q99758 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.78□□□□□ -1.8
ABCA3Q99758 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.78□□□□□ -1.8
ABCA3Q99758 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ABCA3Q99758 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ABCA3Q99758 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.78□□□□□ -1.8
ABCA3Q99758 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
ABCA3Q99758 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.78□□□□□ -1.8
ABCA3Q99758 AL356057.3-201ENST00000402607 340 ntBASIC3.78□□□□□ -1.8
ABCA3Q99758 RNA5SP508-201ENST00000411327 119 ntBASIC3.78□□□□□ -1.8
ABCA3Q99758 AL513477.1-202ENST00000417061 214 ntBASIC3.78□□□□□ -1.8
ABCA3Q99758 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ABCA3Q99758 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
ABCA3Q99758 RPL29P29-201ENST00000448725 423 ntBASIC3.78□□□□□ -1.8
ABCA3Q99758 RPS6P4-201ENST00000494693 758 ntBASIC3.78□□□□□ -1.8
ABCA3Q99758 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.78□□□□□ -1.8
ABCA3Q99758 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.78□□□□□ -1.8
ABCA3Q99758 AC006111.3-201ENST00000622137 383 ntBASIC3.78□□□□□ -1.8
ABCA3Q99758 AC027287.1-201ENST00000553115 1453 ntBASIC3.78□□□□□ -1.8
ABCA3Q99758 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ABCA3Q99758 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.77□□□□□ -1.81
ABCA3Q99758 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ABCA3Q99758 FAM133CP-201ENST00000332869 704 ntBASIC3.77□□□□□ -1.81
ABCA3Q99758 AC019155.1-201ENST00000382242 574 ntBASIC3.77□□□□□ -1.81
ABCA3Q99758 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ABCA3Q99758 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.77□□□□□ -1.81
ABCA3Q99758 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.77□□□□□ -1.81
ABCA3Q99758 MTCO1P52-201ENST00000433928 531 ntBASIC3.77□□□□□ -1.81
ABCA3Q99758 MTND6P18-201ENST00000439477 513 ntBASIC3.77□□□□□ -1.81
ABCA3Q99758 snoU13.15-201ENST00000459407 104 ntBASIC3.77□□□□□ -1.81
ABCA3Q99758 AC005351.1-201ENST00000511152 786 ntBASIC3.77□□□□□ -1.81
ABCA3Q99758 AC018797.3-201ENST00000513388 1241 ntBASIC3.77□□□□□ -1.81
ABCA3Q99758 AF186190.1-201ENST00000517470 480 ntBASIC3.77□□□□□ -1.81
ABCA3Q99758 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ABCA3Q99758 TGIF1P1-201ENST00000558095 802 ntBASIC3.77□□□□□ -1.81
ABCA3Q99758 AC008507.1-201ENST00000587506 734 ntBASIC3.77□□□□□ -1.81
ABCA3Q99758 AC098826.3-201ENST00000603823 466 ntBASIC3.77□□□□□ -1.81
ABCA3Q99758 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
ABCA3Q99758 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ABCA3Q99758 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.77□□□□□ -1.81
ABCA3Q99758 MTND5P24-201ENST00000438892 1767 ntBASIC3.76□□□□□ -1.81
ABCA3Q99758 MIR184-201ENST00000384962 84 ntBASIC3.76□□□□□ -1.81
ABCA3Q99758 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.76□□□□□ -1.81
ABCA3Q99758 AL450263.2-201ENST00000439400 589 ntBASIC3.76□□□□□ -1.81
ABCA3Q99758 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.76□□□□□ -1.81
ABCA3Q99758 HMGN1P18-201ENST00000457642 277 ntBASIC3.76□□□□□ -1.81
ABCA3Q99758 AC010401.1-201ENST00000463867 348 ntBASIC3.76□□□□□ -1.81
ABCA3Q99758 AC126121.1-201ENST00000482313 553 ntBASIC3.76□□□□□ -1.81
ABCA3Q99758 FAM172BP-201ENST00000487497 1089 ntBASIC3.76□□□□□ -1.81
ABCA3Q99758 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.76□□□□□ -1.81
ABCA3Q99758 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.76□□□□□ -1.81
ABCA3Q99758 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.76□□□□□ -1.81
ABCA3Q99758 AC025946.2-201ENST00000603398 234 ntBASIC3.76□□□□□ -1.81
ABCA3Q99758 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.76□□□□□ -1.81
ABCA3Q99758 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.76□□□□□ -1.81
ABCA3Q99758 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
ABCA3Q99758 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
ABCA3Q99758 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.76□□□□□ -1.81
ABCA3Q99758 RPL7P26-201ENST00000333817 754 ntBASIC3.75□□□□□ -1.81
ABCA3Q99758 RNA5SP68-201ENST00000363885 119 ntBASIC3.75□□□□□ -1.81
ABCA3Q99758 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
ABCA3Q99758 AC073136.2-201ENST00000417282 849 ntBASIC3.75□□□□□ -1.81
ABCA3Q99758 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.75□□□□□ -1.81
ABCA3Q99758 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.75□□□□□ -1.81
ABCA3Q99758 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.75□□□□□ -1.81
ABCA3Q99758 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.75□□□□□ -1.81
ABCA3Q99758 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.75□□□□□ -1.81
ABCA3Q99758 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.75□□□□□ -1.81
ABCA3Q99758 RNU6-991P-201ENST00000516168 107 ntBASIC3.75□□□□□ -1.81
ABCA3Q99758 RNA5SP320-201ENST00000516263 124 ntBASIC3.75□□□□□ -1.81
ABCA3Q99758 RNA5SP282-201ENST00000516355 108 ntBASIC3.75□□□□□ -1.81
ABCA3Q99758 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
ABCA3Q99758 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
ABCA3Q99758 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.75□□□□□ -1.81
ABCA3Q99758 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
ABCA3Q99758 ATP5F1P6-201ENST00000402768 767 ntBASIC3.75□□□□□ -1.81
ABCA3Q99758 RAP1BP1-201ENST00000412709 553 ntBASIC3.75□□□□□ -1.81
ABCA3Q99758 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.75□□□□□ -1.81
ABCA3Q99758 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.75□□□□□ -1.81
ABCA3Q99758 AC107015.1-201ENST00000466902 747 ntBASIC3.75□□□□□ -1.81
ABCA3Q99758 AC003982.1-202ENST00000469928 248 ntBASIC3.75□□□□□ -1.81
ABCA3Q99758 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.75□□□□□ -1.81
ABCA3Q99758 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
ABCA3Q99758 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
ABCA3Q99758 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
ABCA3Q99758 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
ABCA3Q99758 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms