Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 PRDX4P1-201ENST00000507189 574 ntBASIC3.22□□□□□ -1.89
LITAFQ99732 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC3.22□□□□□ -1.89
LITAFQ99732 NACAP5-201ENST00000509863 636 ntBASIC3.22□□□□□ -1.89
LITAFQ99732 PPBPP1-201ENST00000510807 373 ntBASIC3.22□□□□□ -1.89
LITAFQ99732 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.22□□□□□ -1.89
LITAFQ99732 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
LITAFQ99732 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC3.22□□□□□ -1.89
LITAFQ99732 RNA5SP96-201ENST00000516041 107 ntBASIC3.22□□□□□ -1.89
LITAFQ99732 RNU6-709P-201ENST00000517257 104 ntBASIC3.22□□□□□ -1.89
LITAFQ99732 AC008694.2-201ENST00000517591 306 ntBASIC3.22□□□□□ -1.89
LITAFQ99732 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LITAFQ99732 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC3.22□□□□□ -1.89
LITAFQ99732 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LITAFQ99732 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.22□□□□□ -1.89
LITAFQ99732 CENPUP2-201ENST00000555897 1186 ntBASIC3.22□□□□□ -1.89
LITAFQ99732 AL049872.1-201ENST00000556323 322 ntBASIC3.22□□□□□ -1.89
LITAFQ99732 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC3.22□□□□□ -1.89
LITAFQ99732 AC124068.1-201ENST00000563131 678 ntBASIC3.22□□□□□ -1.89
LITAFQ99732 BGLT3-201ENST00000564523 994 ntBASIC3.22□□□□□ -1.89
LITAFQ99732 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC3.22□□□□□ -1.89
LITAFQ99732 AC034268.2-201ENST00000571784 482 ntBASIC3.22□□□□□ -1.89
LITAFQ99732 NRBF2P1-201ENST00000587407 859 ntBASIC3.22□□□□□ -1.89
LITAFQ99732 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC3.22□□□□□ -1.89
LITAFQ99732 AL139395.1-201ENST00000603662 160 ntBASIC3.22□□□□□ -1.89
LITAFQ99732 SUGT1P3-202ENST00000604259 383 ntBASIC3.22□□□□□ -1.89
LITAFQ99732 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.22□□□□□ -1.89
LITAFQ99732 AC009318.4-201ENST00000620496 486 ntBASIC3.22□□□□□ -1.89
LITAFQ99732 AL359880.1-201ENST00000621879 266 ntBASIC3.22□□□□□ -1.89
LITAFQ99732 AC129778.1-202ENST00000623812 261 ntBASIC3.22□□□□□ -1.89
LITAFQ99732 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.22□□□□□ -1.89
LITAFQ99732 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC3.22□□□□□ -1.89
LITAFQ99732 AL591379.1-207ENST00000635982 261 ntBASIC3.22□□□□□ -1.89
LITAFQ99732 AMYH02020865.1-205ENST00000636189 261 ntBASIC3.22□□□□□ -1.89
LITAFQ99732 AC007603.3-201ENST00000636915 979 ntBASIC3.22□□□□□ -1.89
LITAFQ99732 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
LITAFQ99732 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LITAFQ99732 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LITAFQ99732 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
LITAFQ99732 AC007529.1-201ENST00000418574 2178 ntBASIC3.22□□□□□ -1.89
LITAFQ99732 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LITAFQ99732 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
LITAFQ99732 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
LITAFQ99732 DLD-205ENST00000440410 1993 ntTSL 2 BASIC3.21□□□□□ -1.89
LITAFQ99732 AP000542.2-201ENST00000623199 6179 ntBASIC3.21□□□□□ -1.89
LITAFQ99732 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.21□□□□□ -1.89
LITAFQ99732 AL122126.1-201ENST00000546905 1318 ntBASIC3.21□□□□□ -1.89
LITAFQ99732 AC008758.3-201ENST00000507003 1829 ntBASIC3.21□□□□□ -1.89
LITAFQ99732 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
LITAFQ99732 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LITAFQ99732 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
LITAFQ99732 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.21□□□□□ -1.9
LITAFQ99732 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
LITAFQ99732 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.21□□□□□ -1.9
LITAFQ99732 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
LITAFQ99732 AL080312.1-201ENST00000256654 824 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
LITAFQ99732 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
LITAFQ99732 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LITAFQ99732 RNU6-28P-201ENST00000362378 107 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 RNA5SP234-201ENST00000363916 119 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 RNU6-853P-201ENST00000364306 107 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 RNA5SP132-201ENST00000364725 118 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 RNU5E-4P-201ENST00000364931 120 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 Y_RNA.372-201ENST00000365599 102 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.21□□□□□ -1.9
LITAFQ99732 Y_RNA.390-201ENST00000383932 102 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 Y_RNA.450-201ENST00000384198 113 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
LITAFQ99732 CALM2P3-201ENST00000400429 449 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 RNA5SP104-201ENST00000410989 118 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.21□□□□□ -1.9
LITAFQ99732 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.21□□□□□ -1.9
LITAFQ99732 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
LITAFQ99732 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 BMS1P17-202ENST00000416720 316 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 MTATP6P27-201ENST00000416987 621 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 RPL31P45-201ENST00000419532 356 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 AC093155.2-201ENST00000420734 937 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.21□□□□□ -1.9
LITAFQ99732 PIGFP2-201ENST00000421400 651 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 AC069157.1-201ENST00000421749 137 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 AC009480.2-201ENST00000422916 432 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC3.21□□□□□ -1.9
LITAFQ99732 AC104837.2-201ENST00000427236 424 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 DPPA2P1-201ENST00000428060 556 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 AL590233.1-201ENST00000430017 456 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 ARPC3P1-201ENST00000437218 533 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC3.21□□□□□ -1.9
LITAFQ99732 AC000111.2-201ENST00000448200 210 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.21□□□□□ -1.9
LITAFQ99732 AC079448.1-201ENST00000449377 373 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 AL591623.2-201ENST00000449978 222 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.21□□□□□ -1.9
LITAFQ99732 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.21□□□□□ -1.9
LITAFQ99732 AC092989.1-201ENST00000481235 277 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 AC012158.1-204ENST00000483430 465 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 RN7SL568P-201ENST00000493069 298 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 AC025445.1-201ENST00000502728 300 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 RNF138P1-201ENST00000502765 546 ntBASIC3.21□□□□□ -1.9
LITAFQ99732 FAM92A1P2-202ENST00000504766 877 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms