Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.15□□□□□ -1.75
PKP4Q99569 Z69908.1-201ENST00000622603 247 ntBASIC4.15□□□□□ -1.75
PKP4Q99569 AC091965.5-201ENST00000624785 342 ntBASIC4.15□□□□□ -1.75
PKP4Q99569 MTND5P3-201ENST00000438536 1800 ntBASIC4.15□□□□□ -1.75
PKP4Q99569 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PKP4Q99569 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.15□□□□□ -1.75
PKP4Q99569 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
PKP4Q99569 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PKP4Q99569 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PKP4Q99569 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PKP4Q99569 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
PKP4Q99569 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.14□□□□□ -1.75
PKP4Q99569 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PKP4Q99569 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PKP4Q99569 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PKP4Q99569 AC011266.1-201ENST00000624119 3569 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
PKP4Q99569 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PKP4Q99569 FAM3C2-201ENST00000312214 681 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 RNU1-14P-201ENST00000362759 152 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 Y_RNA.192-201ENST00000363977 102 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 RNU6-560P-201ENST00000364007 108 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 RNU6-553P-201ENST00000364047 96 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PKP4Q99569 AL590084.2-201ENST00000401481 382 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.14□□□□□ -1.75
PKP4Q99569 RNU4-25P-201ENST00000410569 230 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.14□□□□□ -1.75
PKP4Q99569 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.14□□□□□ -1.75
PKP4Q99569 AC098592.1-201ENST00000419352 333 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 AC019178.2-201ENST00000423595 505 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.14□□□□□ -1.75
PKP4Q99569 NIPA2P1-201ENST00000426223 976 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 AC010153.1-201ENST00000432862 727 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.14□□□□□ -1.75
PKP4Q99569 USP9YP7-201ENST00000436723 430 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 AL354941.1-201ENST00000438600 464 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 ELOCP8-201ENST00000439309 332 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 ELOCP15-201ENST00000442090 332 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.14□□□□□ -1.75
PKP4Q99569 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.14□□□□□ -1.75
PKP4Q99569 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.14□□□□□ -1.75
PKP4Q99569 USP9YP32-201ENST00000452432 430 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 SNRPGP5-201ENST00000456003 220 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 MTCO2P18-201ENST00000457151 658 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 RN7SL303P-201ENST00000469773 251 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 RN7SL481P-201ENST00000477764 299 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 RPS27P23-201ENST00000487608 251 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 RPL35P6-201ENST00000490024 372 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 AC092045.1-201ENST00000495716 1231 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 AC020593.1-201ENST00000507399 299 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.14□□□□□ -1.75
PKP4Q99569 PPBPP1-201ENST00000510807 373 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.14□□□□□ -1.75
PKP4Q99569 AC093755.1-201ENST00000512950 1023 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 RNU6-759P-201ENST00000516740 103 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 RNA5SP73-201ENST00000516744 108 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.14□□□□□ -1.75
PKP4Q99569 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.14□□□□□ -1.75
PKP4Q99569 AP000619.3-201ENST00000535634 1127 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.14□□□□□ -1.75
PKP4Q99569 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.14□□□□□ -1.75
PKP4Q99569 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.14□□□□□ -1.75
PKP4Q99569 PSMB7P1-201ENST00000556349 514 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.14□□□□□ -1.75
PKP4Q99569 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.14□□□□□ -1.75
PKP4Q99569 VN1R79P-201ENST00000593540 513 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.14□□□□□ -1.75
PKP4Q99569 AC008687.2-201ENST00000597865 520 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 AC064872.1-201ENST00000604823 1072 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 AC114781.5-201ENST00000615297 108 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 RMST_9.1-201ENST00000619945 193 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 AC068792.1-201ENST00000621354 417 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 AC087821.2-201ENST00000637086 450 ntBASIC4.14□□□□□ -1.75
PKP4Q99569 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.14□□□□□ -1.75
PKP4Q99569 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PKP4Q99569 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PKP4Q99569 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
PKP4Q99569 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.14□□□□□ -1.75
PKP4Q99569 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PKP4Q99569 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PKP4Q99569 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
PKP4Q99569 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PKP4Q99569 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PKP4Q99569 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PKP4Q99569 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
PKP4Q99569 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PKP4Q99569 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.13□□□□□ -1.75
PKP4Q99569 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PKP4Q99569 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.13□□□□□ -1.75
PKP4Q99569 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PKP4Q99569 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PKP4Q99569 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.13□□□□□ -1.75
PKP4Q99569 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PKP4Q99569 AC007685.1-201ENST00000329806 452 ntBASIC4.13□□□□□ -1.75
PKP4Q99569 RNU1-108P-201ENST00000362556 161 ntBASIC4.13□□□□□ -1.75
PKP4Q99569 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.13□□□□□ -1.75
PKP4Q99569 DSTNP4-201ENST00000399472 474 ntBASIC4.13□□□□□ -1.75
PKP4Q99569 RPL31P2-201ENST00000413849 377 ntBASIC4.13□□□□□ -1.75
PKP4Q99569 PSMA2P3-201ENST00000429685 675 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms