Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.56□□□□□ -1.68
VPS50Q96JG6 RN7SL558P-201ENST00000497468 299 ntBASIC4.56□□□□□ -1.68
VPS50Q96JG6 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VPS50Q96JG6 AC006499.5-201ENST00000505037 514 ntBASIC4.56□□□□□ -1.68
VPS50Q96JG6 MTATP6P22-201ENST00000507369 598 ntBASIC4.56□□□□□ -1.68
VPS50Q96JG6 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS50Q96JG6 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS50Q96JG6 AC010625.1-201ENST00000511296 403 ntBASIC4.56□□□□□ -1.68
VPS50Q96JG6 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.56□□□□□ -1.68
VPS50Q96JG6 RNU2-30P-201ENST00000516209 141 ntBASIC4.56□□□□□ -1.68
VPS50Q96JG6 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.56□□□□□ -1.68
VPS50Q96JG6 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
VPS50Q96JG6 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS50Q96JG6 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS50Q96JG6 ARL2BPP5-201ENST00000523141 481 ntBASIC4.56□□□□□ -1.68
VPS50Q96JG6 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS50Q96JG6 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS50Q96JG6 HIGD1AP5-201ENST00000529959 259 ntBASIC4.56□□□□□ -1.68
VPS50Q96JG6 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS50Q96JG6 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS50Q96JG6 AL121834.1-201ENST00000572284 509 ntBASIC4.56□□□□□ -1.68
VPS50Q96JG6 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS50Q96JG6 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS50Q96JG6 SLC25A36P1-201ENST00000590111 465 ntBASIC4.56□□□□□ -1.68
VPS50Q96JG6 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VPS50Q96JG6 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS50Q96JG6 AL139395.1-201ENST00000603662 160 ntBASIC4.56□□□□□ -1.68
VPS50Q96JG6 AC093765.1-201ENST00000603758 881 ntBASIC4.56□□□□□ -1.68
VPS50Q96JG6 COX6CP4-201ENST00000605798 228 ntBASIC4.56□□□□□ -1.68
VPS50Q96JG6 AL139286.2-201ENST00000606838 396 ntBASIC4.56□□□□□ -1.68
VPS50Q96JG6 AC107214.2-201ENST00000608204 634 ntBASIC4.56□□□□□ -1.68
VPS50Q96JG6 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS50Q96JG6 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS50Q96JG6 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS50Q96JG6 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
VPS50Q96JG6 CR383658.2-201ENST00000547576 1525 ntBASIC4.56□□□□□ -1.68
VPS50Q96JG6 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
VPS50Q96JG6 ZFRP1-201ENST00000457579 2970 ntBASIC4.56□□□□□ -1.68
VPS50Q96JG6 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VPS50Q96JG6 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS50Q96JG6 MTND4P16-201ENST00000466108 1367 ntBASIC4.55□□□□□ -1.68
VPS50Q96JG6 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VPS50Q96JG6 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS50Q96JG6 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS50Q96JG6 OR11H5P-202ENST00000641612 1325 ntBASIC4.55□□□□□ -1.68
VPS50Q96JG6 AC090229.1-201ENST00000590983 1609 ntBASIC4.55□□□□□ -1.68
VPS50Q96JG6 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS50Q96JG6 RNU1-85P-201ENST00000364127 164 ntBASIC4.55□□□□□ -1.68
VPS50Q96JG6 RNA5SP513-201ENST00000364648 118 ntBASIC4.55□□□□□ -1.68
VPS50Q96JG6 RNU6-441P-201ENST00000384545 106 ntBASIC4.55□□□□□ -1.68
VPS50Q96JG6 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS50Q96JG6 Y_RNA.599-201ENST00000410489 109 ntBASIC4.55□□□□□ -1.68
VPS50Q96JG6 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.55□□□□□ -1.68
VPS50Q96JG6 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS50Q96JG6 AL359265.2-201ENST00000434367 631 ntBASIC4.55□□□□□ -1.68
VPS50Q96JG6 AC092427.1-201ENST00000439177 601 ntBASIC4.55□□□□□ -1.68
VPS50Q96JG6 AL512286.1-201ENST00000439244 400 ntBASIC4.55□□□□□ -1.68
VPS50Q96JG6 AL353748.1-201ENST00000440753 474 ntBASIC4.55□□□□□ -1.68
VPS50Q96JG6 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS50Q96JG6 COX6CP2-201ENST00000444980 225 ntBASIC4.55□□□□□ -1.68
VPS50Q96JG6 AL162591.2-201ENST00000449634 317 ntBASIC4.55□□□□□ -1.68
VPS50Q96JG6 SNRPGP9-201ENST00000456025 225 ntBASIC4.55□□□□□ -1.68
VPS50Q96JG6 FTH1P24-201ENST00000503502 462 ntBASIC4.55□□□□□ -1.68
VPS50Q96JG6 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS50Q96JG6 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.55□□□□□ -1.68
VPS50Q96JG6 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS50Q96JG6 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS50Q96JG6 AC239860.2-201ENST00000525886 270 ntBASIC4.55□□□□□ -1.68
VPS50Q96JG6 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS50Q96JG6 AC087276.1-201ENST00000529659 480 ntBASIC4.55□□□□□ -1.68
VPS50Q96JG6 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS50Q96JG6 AL391156.1-201ENST00000554965 554 ntBASIC4.55□□□□□ -1.68
VPS50Q96JG6 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.55□□□□□ -1.68
VPS50Q96JG6 SULT1C2P1-202ENST00000562418 459 ntBASIC4.55□□□□□ -1.68
VPS50Q96JG6 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS50Q96JG6 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.55□□□□□ -1.68
VPS50Q96JG6 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS50Q96JG6 AC010680.3-201ENST00000604215 520 ntBASIC4.55□□□□□ -1.68
VPS50Q96JG6 AL121932.1-201ENST00000605542 214 ntBASIC4.55□□□□□ -1.68
VPS50Q96JG6 AC004492.1-201ENST00000607036 742 ntBASIC4.55□□□□□ -1.68
VPS50Q96JG6 AC010424.2-201ENST00000607594 443 ntBASIC4.55□□□□□ -1.68
VPS50Q96JG6 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS50Q96JG6 FAM27B-201ENST00000610601 213 ntBASIC4.55□□□□□ -1.68
VPS50Q96JG6 AC009509.4-201ENST00000619202 509 ntBASIC4.55□□□□□ -1.68
VPS50Q96JG6 AC006927.3-201ENST00000638789 384 ntBASIC4.55□□□□□ -1.68
VPS50Q96JG6 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS50Q96JG6 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS50Q96JG6 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS50Q96JG6 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VPS50Q96JG6 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS50Q96JG6 AC011266.1-201ENST00000624119 3569 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS50Q96JG6 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
VPS50Q96JG6 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS50Q96JG6 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VPS50Q96JG6 AC117529.2-201ENST00000512159 2068 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS50Q96JG6 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VPS50Q96JG6 AC079741.1-201ENST00000321498 212 ntBASIC4.54□□□□□ -1.68
VPS50Q96JG6 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms