Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AL356535.1-201ENST00000440335 398 ntBASIC4□□□□□ -1.77
VMP1Q96GC9 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
VMP1Q96GC9 HMGN1P5-201ENST00000448591 263 ntBASIC4□□□□□ -1.77
VMP1Q96GC9 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4□□□□□ -1.77
VMP1Q96GC9 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4□□□□□ -1.77
VMP1Q96GC9 RPL7P22-201ENST00000466005 733 ntBASIC4□□□□□ -1.77
VMP1Q96GC9 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4□□□□□ -1.77
VMP1Q96GC9 AC015908.1-201ENST00000478739 476 ntBASIC4□□□□□ -1.77
VMP1Q96GC9 RN7SL691P-201ENST00000494487 301 ntBASIC4□□□□□ -1.77
VMP1Q96GC9 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4□□□□□ -1.77
VMP1Q96GC9 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4□□□□□ -1.77
VMP1Q96GC9 AC008958.1-201ENST00000511047 682 ntBASIC4□□□□□ -1.77
VMP1Q96GC9 RPL12P22-201ENST00000519073 490 ntBASIC4□□□□□ -1.77
VMP1Q96GC9 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4□□□□□ -1.77
VMP1Q96GC9 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4□□□□□ -1.77
VMP1Q96GC9 TVP23BP1-201ENST00000557500 617 ntBASIC4□□□□□ -1.77
VMP1Q96GC9 AC136624.4-201ENST00000573044 370 ntBASIC4□□□□□ -1.77
VMP1Q96GC9 AC090666.1-201ENST00000578241 445 ntBASIC4□□□□□ -1.77
VMP1Q96GC9 MIR4474-201ENST00000579189 78 ntBASIC4□□□□□ -1.77
VMP1Q96GC9 AC126365.2-201ENST00000580630 379 ntBASIC4□□□□□ -1.77
VMP1Q96GC9 SNORD84-203ENST00000584275 78 ntBASIC4□□□□□ -1.77
VMP1Q96GC9 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4□□□□□ -1.77
VMP1Q96GC9 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4□□□□□ -1.77
VMP1Q96GC9 AL592148.2-201ENST00000612210 372 ntBASIC4□□□□□ -1.77
VMP1Q96GC9 FAM27D1-201ENST00000612308 341 ntBASIC4□□□□□ -1.77
VMP1Q96GC9 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4□□□□□ -1.77
VMP1Q96GC9 AC080188.3-201ENST00000624842 748 ntBASIC4□□□□□ -1.77
VMP1Q96GC9 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4□□□□□ -1.77
VMP1Q96GC9 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
VMP1Q96GC9 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
VMP1Q96GC9 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VMP1Q96GC9 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
VMP1Q96GC9 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VMP1Q96GC9 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
VMP1Q96GC9 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
VMP1Q96GC9 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VMP1Q96GC9 RNU1-14P-201ENST00000362759 152 ntBASIC3.99□□□□□ -1.77
VMP1Q96GC9 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.99□□□□□ -1.77
VMP1Q96GC9 AC016769.3-201ENST00000396562 315 ntBASIC3.99□□□□□ -1.77
VMP1Q96GC9 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.99□□□□□ -1.77
VMP1Q96GC9 RNU2-28P-201ENST00000410457 189 ntBASIC3.99□□□□□ -1.77
VMP1Q96GC9 NRBF2P2-201ENST00000413087 861 ntBASIC3.99□□□□□ -1.77
VMP1Q96GC9 MFSD13B-201ENST00000420133 1290 ntBASIC3.99□□□□□ -1.77
VMP1Q96GC9 RPL23AP38-201ENST00000423801 469 ntBASIC3.99□□□□□ -1.77
VMP1Q96GC9 NEK4P1-201ENST00000433383 879 ntBASIC3.99□□□□□ -1.77
VMP1Q96GC9 ARL4AP4-201ENST00000434170 518 ntBASIC3.99□□□□□ -1.77
VMP1Q96GC9 TPTE2P3-201ENST00000441562 1189 ntBASIC3.99□□□□□ -1.77
VMP1Q96GC9 NUTF2P3-201ENST00000448540 384 ntBASIC3.99□□□□□ -1.77
VMP1Q96GC9 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.99□□□□□ -1.77
VMP1Q96GC9 RPL23AP81-201ENST00000455252 467 ntBASIC3.99□□□□□ -1.77
VMP1Q96GC9 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.99□□□□□ -1.77
VMP1Q96GC9 AC105137.1-201ENST00000484355 562 ntBASIC3.99□□□□□ -1.77
VMP1Q96GC9 AC041039.1-201ENST00000485656 536 ntBASIC3.99□□□□□ -1.77
VMP1Q96GC9 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.99□□□□□ -1.77
VMP1Q96GC9 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.99□□□□□ -1.77
VMP1Q96GC9 AC108475.1-201ENST00000507880 950 ntBASIC3.99□□□□□ -1.77
VMP1Q96GC9 AC112198.4-201ENST00000515450 351 ntBASIC3.99□□□□□ -1.77
VMP1Q96GC9 RN7SKP13-201ENST00000515933 244 ntBASIC3.99□□□□□ -1.77
VMP1Q96GC9 RNA5SP49-201ENST00000516450 115 ntBASIC3.99□□□□□ -1.77
VMP1Q96GC9 IGHV3-76-201ENST00000522465 295 ntBASIC3.99□□□□□ -1.77
VMP1Q96GC9 MTCO3P15-201ENST00000526563 574 ntBASIC3.99□□□□□ -1.77
VMP1Q96GC9 AL139174.1-201ENST00000531489 886 ntBASIC3.99□□□□□ -1.77
VMP1Q96GC9 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.99□□□□□ -1.77
VMP1Q96GC9 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.99□□□□□ -1.77
VMP1Q96GC9 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.99□□□□□ -1.77
VMP1Q96GC9 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VMP1Q96GC9 AC068620.3-201ENST00000602749 560 ntBASIC3.99□□□□□ -1.77
VMP1Q96GC9 AC055876.5-201ENST00000605667 259 ntBASIC3.99□□□□□ -1.77
VMP1Q96GC9 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.99□□□□□ -1.77
VMP1Q96GC9 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.99□□□□□ -1.77
VMP1Q96GC9 AL445567.2-201ENST00000618935 498 ntBASIC3.99□□□□□ -1.77
VMP1Q96GC9 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.99□□□□□ -1.77
VMP1Q96GC9 AC007546.1-201ENST00000619452 559 ntBASIC3.99□□□□□ -1.77
VMP1Q96GC9 AL590240.3-201ENST00000621416 943 ntBASIC3.99□□□□□ -1.77
VMP1Q96GC9 AC092628.2-201ENST00000622492 339 ntBASIC3.99□□□□□ -1.77
VMP1Q96GC9 AC019278.1-201ENST00000623516 479 ntBASIC3.99□□□□□ -1.77
VMP1Q96GC9 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VMP1Q96GC9 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
VMP1Q96GC9 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.99□□□□□ -1.77
VMP1Q96GC9 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VMP1Q96GC9 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.99□□□□□ -1.77
VMP1Q96GC9 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.99□□□□□ -1.77
VMP1Q96GC9 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VMP1Q96GC9 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.98□□□□□ -1.77
VMP1Q96GC9 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.98□□□□□ -1.77
VMP1Q96GC9 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.98□□□□□ -1.77
VMP1Q96GC9 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VMP1Q96GC9 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
VMP1Q96GC9 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
VMP1Q96GC9 U3.29-201ENST00000391296 212 ntBASIC3.98□□□□□ -1.77
VMP1Q96GC9 AL583835.1-201ENST00000399570 407 ntBASIC3.98□□□□□ -1.77
VMP1Q96GC9 AL035405.1-201ENST00000400795 710 ntBASIC3.98□□□□□ -1.77
VMP1Q96GC9 RNA5SP36-201ENST00000410197 133 ntBASIC3.98□□□□□ -1.77
VMP1Q96GC9 RNU4-65P-201ENST00000410473 140 ntBASIC3.98□□□□□ -1.77
VMP1Q96GC9 RN7SKP235-201ENST00000410662 305 ntBASIC3.98□□□□□ -1.77
VMP1Q96GC9 AL024507.1-201ENST00000412741 274 ntBASIC3.98□□□□□ -1.77
VMP1Q96GC9 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.98□□□□□ -1.77
VMP1Q96GC9 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.98□□□□□ -1.77
VMP1Q96GC9 RBMY1KP-201ENST00000423480 476 ntBASIC3.98□□□□□ -1.77
VMP1Q96GC9 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms