Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
HPS3Q969F9 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.99□□□□□ -1.61
HPS3Q969F9 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.99□□□□□ -1.61
HPS3Q969F9 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.99□□□□□ -1.61
HPS3Q969F9 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
HPS3Q969F9 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HPS3Q969F9 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.99□□□□□ -1.61
HPS3Q969F9 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.99□□□□□ -1.61
HPS3Q969F9 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.99□□□□□ -1.61
HPS3Q969F9 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.99□□□□□ -1.61
HPS3Q969F9 U73023.1-201ENST00000603134 700 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 AC115286.1-201ENST00000604298 434 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 AC008966.2-201ENST00000606157 453 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 AL513477.2-201ENST00000607858 568 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.99□□□□□ -1.61
HPS3Q969F9 uc_338.18-201ENST00000615451 175 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 CYP3A51P-201ENST00000633513 256 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 AL596275.2-204ENST00000641628 552 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 AL596275.2-206ENST00000641957 626 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 AL592437.2-201ENST00000421655 2434 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.99□□□□□ -1.61
HPS3Q969F9 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.99□□□□□ -1.61
HPS3Q969F9 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.99□□□□□ -1.61
HPS3Q969F9 EOGT-210ENST00000615922 1931 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HPS3Q969F9 SAGE4P-201ENST00000442271 3381 ntBASIC4.99□□□□□ -1.61
HPS3Q969F9 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HPS3Q969F9 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.98□□□□□ -1.61
HPS3Q969F9 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HPS3Q969F9 AL031985.3-201ENST00000565390 2449 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HPS3Q969F9 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.98□□□□□ -1.61
HPS3Q969F9 MTCO1P23-201ENST00000415223 1526 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
HPS3Q969F9 MFSD8-216ENST00000641147 4009 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.98□□□□□ -1.61
HPS3Q969F9 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HPS3Q969F9 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.98□□□□□ -1.61
HPS3Q969F9 OR10J6P-201ENST00000289731 930 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HPS3Q969F9 RNU6-433P-201ENST00000363216 104 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 RNU1-130P-201ENST00000363930 160 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.98□□□□□ -1.61
HPS3Q969F9 AC007066.1-201ENST00000392902 381 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 GLULP6-201ENST00000399502 913 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 VN1R8P-201ENST00000407739 893 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 RPL31P2-201ENST00000413849 377 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 HMGB1P11-201ENST00000413899 637 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 RPL7P30-201ENST00000420888 709 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 RPL7AP25-201ENST00000423357 805 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.98□□□□□ -1.61
HPS3Q969F9 AL512286.1-201ENST00000439244 400 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 TAF9P1-201ENST00000445421 515 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.98□□□□□ -1.61
HPS3Q969F9 TAF9P2-201ENST00000454958 515 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 RPS29P33-201ENST00000456717 146 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 MTCO2P18-201ENST00000457151 658 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 TPTE2P5-203ENST00000458118 728 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.98□□□□□ -1.61
HPS3Q969F9 AC091965.2-201ENST00000512324 613 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.98□□□□□ -1.61
HPS3Q969F9 Y_RNA.655-201ENST00000515919 96 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 RPL12P22-201ENST00000519073 490 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HPS3Q969F9 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.98□□□□□ -1.61
HPS3Q969F9 AC007115.1-201ENST00000546853 234 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 LARP7P2-201ENST00000575306 125 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.98□□□□□ -1.61
HPS3Q969F9 AC073544.2-201ENST00000601155 540 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 AC064872.1-201ENST00000604823 1072 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 AC010201.1-201ENST00000605051 540 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 AC113194.1-201ENST00000606037 500 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 AL031775.1-201ENST00000607014 887 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 AC107214.2-201ENST00000608204 634 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 AC122108.2-201ENST00000611946 526 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 MIR378J-201ENST00000611988 109 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 MIR6780A-201ENST00000615089 68 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 AC140113.4-201ENST00000622087 222 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 AC091905.2-201ENST00000623143 306 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 AC006065.6-201ENST00000625201 545 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.98□□□□□ -1.61
HPS3Q969F9 MIR7641-1-201ENST00000627518 61 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.98□□□□□ -1.61
HPS3Q969F9 LINC00622-201ENST00000562811 1570 ntBASIC4.98□□□□□ -1.61
HPS3Q969F9 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
HPS3Q969F9 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HPS3Q969F9 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
HPS3Q969F9 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HPS3Q969F9 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HPS3Q969F9 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
HPS3Q969F9 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.97□□□□□ -1.61
HPS3Q969F9 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.97□□□□□ -1.61
HPS3Q969F9 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.97□□□□□ -1.61
HPS3Q969F9 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.97□□□□□ -1.61
HPS3Q969F9 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HPS3Q969F9 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.97□□□□□ -1.61
HPS3Q969F9 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
HPS3Q969F9 RNU1-20P-201ENST00000363314 162 ntBASIC4.97□□□□□ -1.61
HPS3Q969F9 RNU5F-7P-201ENST00000363696 115 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms