Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 HSPD1P16-201ENST00000402302 394 ntBASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 XKRYP6-201ENST00000440468 1116 ntBASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 XKRYP3-201ENST00000442113 1116 ntBASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 RPL7P36-201ENST00000444633 681 ntBASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 AC140076.1-201ENST00000449897 361 ntBASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 AC126389.1-201ENST00000477436 290 ntBASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 AC018797.3-201ENST00000513388 1241 ntBASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 COX6CP8-201ENST00000522620 226 ntBASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 MIR4644-201ENST00000579929 84 ntBASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 VN1R90P-201ENST00000595717 726 ntBASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 AP001005.3-201ENST00000622049 129 ntBASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 AL606537.1-201ENST00000607258 2011 ntBASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 OR1S2-201ENST00000302592 978 ntBASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 RNU6-564P-201ENST00000410983 104 ntBASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 BMS1P22-201ENST00000414726 313 ntBASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 AC093156.1-201ENST00000440382 670 ntBASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 AC010095.1-201ENST00000443543 144 ntBASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 HMGN1P8-201ENST00000463578 288 ntBASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 RNU6-943P-201ENST00000516960 98 ntBASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 AL590808.1-201ENST00000618696 141 ntBASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.11□□□□□ -1.91
SHROOM3Q8TF72 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 AC008725.1-201ENST00000605123 2263 ntBASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 AP003122.5-201ENST00000527668 3766 ntBASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 ZNF542P-204ENST00000482727 1305 ntBASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 OR11H5P-202ENST00000641612 1325 ntBASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 AC118273.1-201ENST00000525324 3006 ntBASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 AL353692.2-201ENST00000407054 335 ntBASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 ZYG11AP1-201ENST00000430329 837 ntBASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 AC005189.1-201ENST00000431286 310 ntBASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 RPS27P29-201ENST00000463110 252 ntBASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 OR52A4P-203ENST00000498233 1014 ntBASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 snoU109.6-201ENST00000516831 118 ntBASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 AL049874.4-201ENST00000557593 255 ntBASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 EIF5A2P1-201ENST00000564027 460 ntBASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 GMCL1P2-201ENST00000605230 823 ntBASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.1□□□□□ -1.91
SHROOM3Q8TF72 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SHROOM3Q8TF72 GABRG2-229ENST00000641017 3628 ntBASIC3.09□□□□□ -1.91
SHROOM3Q8TF72 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SHROOM3Q8TF72 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
SHROOM3Q8TF72 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.09□□□□□ -1.91
SHROOM3Q8TF72 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.09□□□□□ -1.91
SHROOM3Q8TF72 ELF2P3-201ENST00000445099 1506 ntBASIC3.09□□□□□ -1.91
SHROOM3Q8TF72 RPL5P18-201ENST00000406671 891 ntBASIC3.09□□□□□ -1.91
SHROOM3Q8TF72 RNU4-47P-201ENST00000410876 114 ntBASIC3.09□□□□□ -1.91
SHROOM3Q8TF72 AL592148.1-201ENST00000413568 445 ntBASIC3.09□□□□□ -1.91
SHROOM3Q8TF72 HMGB3P23-201ENST00000414981 585 ntBASIC3.09□□□□□ -1.91
SHROOM3Q8TF72 IPMKP1-201ENST00000425988 855 ntBASIC3.09□□□□□ -1.91
SHROOM3Q8TF72 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SHROOM3Q8TF72 AC104058.1-201ENST00000448028 297 ntBASIC3.09□□□□□ -1.91
SHROOM3Q8TF72 AL162389.1-201ENST00000449233 177 ntBASIC3.09□□□□□ -1.91
SHROOM3Q8TF72 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.09□□□□□ -1.91
SHROOM3Q8TF72 S100A11P1-201ENST00000477525 312 ntBASIC3.09□□□□□ -1.91
SHROOM3Q8TF72 AC135999.1-201ENST00000478962 479 ntBASIC3.09□□□□□ -1.91
SHROOM3Q8TF72 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.09□□□□□ -1.91
SHROOM3Q8TF72 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.09□□□□□ -1.91
SHROOM3Q8TF72 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.09□□□□□ -1.91
SHROOM3Q8TF72 MTATP6P25-201ENST00000574491 261 ntBASIC3.09□□□□□ -1.91
SHROOM3Q8TF72 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.09□□□□□ -1.91
SHROOM3Q8TF72 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.09□□□□□ -1.91
SHROOM3Q8TF72 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.09□□□□□ -1.91
SHROOM3Q8TF72 AC022509.4-201ENST00000621404 572 ntBASIC3.09□□□□□ -1.91
SHROOM3Q8TF72 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
SHROOM3Q8TF72 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SHROOM3Q8TF72 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.92
SHROOM3Q8TF72 RAD1P1-201ENST00000231383 813 ntBASIC3.09□□□□□ -1.92
SHROOM3Q8TF72 MIR22-201ENST00000362190 85 ntBASIC3.09□□□□□ -1.92
SHROOM3Q8TF72 XGY1-201ENST00000381172 446 ntBASIC3.09□□□□□ -1.92
SHROOM3Q8TF72 SNORD15B-201ENST00000384714 146 ntBASIC3.09□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms