Protein–RNA interactions for Protein: Q8N9S9

SNX31, Sorting nexin-31, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX31Q8N9S9 RNU1-128P-201ENST00000516704 160 ntBASIC3.38□□□□□ -1.87
SNX31Q8N9S9 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.38□□□□□ -1.87
SNX31Q8N9S9 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.38□□□□□ -1.87
SNX31Q8N9S9 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.38□□□□□ -1.87
SNX31Q8N9S9 MTND2P26-201ENST00000528255 1029 ntBASIC3.38□□□□□ -1.87
SNX31Q8N9S9 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.38□□□□□ -1.87
SNX31Q8N9S9 AC004024.1-201ENST00000549244 247 ntBASIC3.38□□□□□ -1.87
SNX31Q8N9S9 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.38□□□□□ -1.87
SNX31Q8N9S9 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.38□□□□□ -1.87
SNX31Q8N9S9 MIR3944-201ENST00000581277 108 ntBASIC3.38□□□□□ -1.87
SNX31Q8N9S9 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.38□□□□□ -1.87
SNX31Q8N9S9 AC005242.1-201ENST00000585658 438 ntBASIC3.38□□□□□ -1.87
SNX31Q8N9S9 AC008507.1-201ENST00000587506 734 ntBASIC3.38□□□□□ -1.87
SNX31Q8N9S9 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
SNX31Q8N9S9 MIR6864-201ENST00000617935 70 ntBASIC3.38□□□□□ -1.87
SNX31Q8N9S9 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.38□□□□□ -1.87
SNX31Q8N9S9 SNORA50A-202ENST00000629536 136 ntBASIC3.38□□□□□ -1.87
SNX31Q8N9S9 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SNX31Q8N9S9 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.38□□□□□ -1.87
SNX31Q8N9S9 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SNX31Q8N9S9 AC009501.3-201ENST00000605001 1352 ntBASIC3.38□□□□□ -1.87
SNX31Q8N9S9 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
SNX31Q8N9S9 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.37□□□□□ -1.87
SNX31Q8N9S9 METTL21EP-201ENST00000298105 713 ntBASIC3.37□□□□□ -1.87
SNX31Q8N9S9 SNORD51.1-201ENST00000365405 77 ntBASIC3.37□□□□□ -1.87
SNX31Q8N9S9 SNORA70.4-201ENST00000365509 134 ntBASIC3.37□□□□□ -1.87
SNX31Q8N9S9 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SNX31Q8N9S9 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.37□□□□□ -1.87
SNX31Q8N9S9 RNA5SP107-201ENST00000411358 122 ntBASIC3.37□□□□□ -1.87
SNX31Q8N9S9 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.37□□□□□ -1.87
SNX31Q8N9S9 RPS15AP40-201ENST00000419621 391 ntBASIC3.37□□□□□ -1.87
SNX31Q8N9S9 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SNX31Q8N9S9 GLRXP1-201ENST00000423261 334 ntBASIC3.37□□□□□ -1.87
SNX31Q8N9S9 ZNF965P-201ENST00000432501 817 ntBASIC3.37□□□□□ -1.87
SNX31Q8N9S9 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.37□□□□□ -1.87
SNX31Q8N9S9 HMGB1P45-201ENST00000435986 653 ntBASIC3.37□□□□□ -1.87
SNX31Q8N9S9 HMGB1P12-201ENST00000438594 598 ntBASIC3.37□□□□□ -1.87
SNX31Q8N9S9 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.37□□□□□ -1.87
SNX31Q8N9S9 AC073387.1-201ENST00000453261 709 ntBASIC3.37□□□□□ -1.87
SNX31Q8N9S9 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SNX31Q8N9S9 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SNX31Q8N9S9 RPL12P22-201ENST00000519073 490 ntBASIC3.37□□□□□ -1.87
SNX31Q8N9S9 TRMT10BP1-201ENST00000519377 943 ntBASIC3.37□□□□□ -1.87
SNX31Q8N9S9 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.37□□□□□ -1.87
SNX31Q8N9S9 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.37□□□□□ -1.87
SNX31Q8N9S9 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.37□□□□□ -1.87
SNX31Q8N9S9 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.37□□□□□ -1.87
SNX31Q8N9S9 AC020914.6-201ENST00000594327 272 ntBASIC3.37□□□□□ -1.87
SNX31Q8N9S9 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.37□□□□□ -1.87
SNX31Q8N9S9 HMGN2P28-201ENST00000606102 262 ntBASIC3.37□□□□□ -1.87
SNX31Q8N9S9 AC107294.3-201ENST00000609211 526 ntBASIC3.37□□□□□ -1.87
SNX31Q8N9S9 MIR7851-201ENST00000610611 160 ntBASIC3.37□□□□□ -1.87
SNX31Q8N9S9 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.37□□□□□ -1.87
SNX31Q8N9S9 MIR4496-201ENST00000635896 61 ntBASIC3.37□□□□□ -1.87
SNX31Q8N9S9 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.37□□□□□ -1.87
SNX31Q8N9S9 MFSD8-233ENST00000641482 4860 ntBASIC3.37□□□□□ -1.87
SNX31Q8N9S9 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SNX31Q8N9S9 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SNX31Q8N9S9 MTND5P27-201ENST00000428871 1720 ntBASIC3.36□□□□□ -1.87
SNX31Q8N9S9 AC116096.1-201ENST00000566804 2314 ntBASIC3.36□□□□□ -1.87
SNX31Q8N9S9 SNORD46.1-201ENST00000364139 104 ntBASIC3.36□□□□□ -1.87
SNX31Q8N9S9 Y_RNA.333-201ENST00000365274 102 ntBASIC3.36□□□□□ -1.87
SNX31Q8N9S9 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SNX31Q8N9S9 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SNX31Q8N9S9 SNORA5A-201ENST00000384111 134 ntBASIC3.36□□□□□ -1.87
SNX31Q8N9S9 EI24P1-201ENST00000416584 867 ntBASIC3.36□□□□□ -1.87
SNX31Q8N9S9 NUP35P2-201ENST00000416748 943 ntBASIC3.36□□□□□ -1.87
SNX31Q8N9S9 AC245291.1-201ENST00000419501 328 ntBASIC3.36□□□□□ -1.87
SNX31Q8N9S9 GTF2IP23-201ENST00000423746 351 ntBASIC3.36□□□□□ -1.87
SNX31Q8N9S9 MTND4P24-201ENST00000424002 397 ntBASIC3.36□□□□□ -1.87
SNX31Q8N9S9 FO393419.3-201ENST00000428741 282 ntBASIC3.36□□□□□ -1.87
SNX31Q8N9S9 YME1L1P1-201ENST00000429435 297 ntBASIC3.36□□□□□ -1.87
SNX31Q8N9S9 RPL7P29-201ENST00000437151 728 ntBASIC3.36□□□□□ -1.87
SNX31Q8N9S9 RPL23AP22-201ENST00000437556 453 ntBASIC3.36□□□□□ -1.87
SNX31Q8N9S9 AL662791.1-201ENST00000441992 928 ntBASIC3.36□□□□□ -1.87
SNX31Q8N9S9 RPL23AP33-201ENST00000442301 452 ntBASIC3.36□□□□□ -1.87
SNX31Q8N9S9 AL133547.1-201ENST00000448546 220 ntBASIC3.36□□□□□ -1.87
SNX31Q8N9S9 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.36□□□□□ -1.87
SNX31Q8N9S9 AC007967.1-201ENST00000455422 1159 ntBASIC3.36□□□□□ -1.87
SNX31Q8N9S9 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.36□□□□□ -1.87
SNX31Q8N9S9 U3.44-201ENST00000458938 192 ntBASIC3.36□□□□□ -1.87
SNX31Q8N9S9 RPL23AP67-201ENST00000465341 474 ntBASIC3.36□□□□□ -1.87
SNX31Q8N9S9 RPL7P49-201ENST00000471402 708 ntBASIC3.36□□□□□ -1.87
SNX31Q8N9S9 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.36□□□□□ -1.87
SNX31Q8N9S9 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.36□□□□□ -1.87
SNX31Q8N9S9 FABP5P12-201ENST00000515543 389 ntBASIC3.36□□□□□ -1.87
SNX31Q8N9S9 AC107934.2-201ENST00000518653 310 ntBASIC3.36□□□□□ -1.87
SNX31Q8N9S9 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.36□□□□□ -1.87
SNX31Q8N9S9 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.36□□□□□ -1.87
SNX31Q8N9S9 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SNX31Q8N9S9 TRAV37-201ENST00000553906 342 ntBASIC3.36□□□□□ -1.87
SNX31Q8N9S9 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.36□□□□□ -1.87
SNX31Q8N9S9 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.36□□□□□ -1.87
SNX31Q8N9S9 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.36□□□□□ -1.87
SNX31Q8N9S9 AC090751.1-201ENST00000566966 267 ntBASIC3.36□□□□□ -1.87
SNX31Q8N9S9 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.36□□□□□ -1.87
SNX31Q8N9S9 AC009948.4-201ENST00000604692 675 ntBASIC3.36□□□□□ -1.87
SNX31Q8N9S9 SNORA51-201ENST00000606420 132 ntBASIC3.36□□□□□ -1.87
SNX31Q8N9S9 AC004775.1-201ENST00000607389 753 ntBASIC3.36□□□□□ -1.87
SNX31Q8N9S9 AC099778.2-201ENST00000610904 211 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms