Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 OR5AK3P-201ENST00000527486 1297 ntBASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 AC025918.2-201ENST00000558683 763 ntBASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 MIR3922-201ENST00000585192 84 ntBASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 AC107308.1-201ENST00000615897 301 ntBASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 MIR1264-201ENST00000616374 69 ntBASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 AL157700.1-201ENST00000561973 1432 ntBASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC65Q8IXS2 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 SRP72P2-201ENST00000344851 1979 ntBASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 MTND4P31-201ENST00000425607 1343 ntBASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 AL590290.1-201ENST00000405336 380 ntBASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 RPL31P2-201ENST00000413849 377 ntBASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 AL356968.1-201ENST00000416622 474 ntBASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 FAM204CP-201ENST00000424489 642 ntBASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 AC097499.1-201ENST00000444277 208 ntBASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 TPTE2P6-202ENST00000445572 1007 ntBASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 NPM1P49-201ENST00000448027 714 ntBASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 RPL23AP23-201ENST00000452590 471 ntBASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 AC021205.2-201ENST00000480069 347 ntBASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 AC110768.1-201ENST00000509222 400 ntBASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 MIR2276-201ENST00000516886 89 ntBASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 IGKV2-26-201ENST00000518305 343 ntBASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 NDUFB9P3-201ENST00000521269 501 ntBASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 POLR2KP1-201ENST00000553226 168 ntBASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 OR4T1P-201ENST00000554933 911 ntBASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 AC010928.3-201ENST00000587712 541 ntBASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 AC069304.3-201ENST00000603938 1084 ntBASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 AL365503.1-201ENST00000605247 905 ntBASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 U3.45-201ENST00000607547 219 ntBASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 AC121761.2-201ENST00000617300 689 ntBASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 U6.48-201ENST00000618523 106 ntBASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC65Q8IXS2 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 ZNF33CP-201ENST00000432492 2030 ntBASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 AL356274.2-201ENST00000624379 3752 ntBASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 RNA5SP197-201ENST00000363357 119 ntBASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 RNU6-1005P-201ENST00000384519 107 ntBASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 MIR142-201ENST00000384835 87 ntBASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 AC004022.2-201ENST00000413824 193 ntBASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 HMGN2P31-201ENST00000432430 273 ntBASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 AC091564.1-201ENST00000464563 479 ntBASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 AL672167.3-201ENST00000465951 960 ntBASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 MTATP6P22-201ENST00000507369 598 ntBASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 OR4A2P-201ENST00000527276 913 ntBASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 AC018618.2-201ENST00000604770 446 ntBASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 AC112503.1-201ENST00000608436 391 ntBASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 AP006248.3-201ENST00000623580 594 ntBASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 U6.107-201ENST00000637108 79 ntBASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 MAPK10-362ENST00000641864 4484 ntBASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC65Q8IXS2 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC65Q8IXS2 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC65Q8IXS2 VTA1P1-201ENST00000414044 866 ntBASIC3.74□□□□□ -1.81
CCDC65Q8IXS2 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC65Q8IXS2 PDSS1P2-201ENST00000449397 678 ntBASIC3.74□□□□□ -1.81
CCDC65Q8IXS2 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms