Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 AL121657.1-201ENST00000327215 531 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 Y_RNA.132-201ENST00000363421 102 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 Y_RNA.144-201ENST00000363521 113 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 RNU6-670P-201ENST00000364312 104 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 RNU6-468P-201ENST00000384003 109 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 Y_RNA.560-201ENST00000384689 102 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 MT-TL1-201ENST00000386347 75 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 AL158050.1-201ENST00000416077 457 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 USP9YP16-201ENST00000430287 407 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 AC000041.1-201ENST00000439655 175 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 DNAJC19P4-201ENST00000440115 345 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 USP9YP23-201ENST00000455085 407 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 RPS20P24-201ENST00000457473 361 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 RNA5SP246-201ENST00000458909 119 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 RPL7P19-201ENST00000469948 618 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 RN7SL41P-201ENST00000476144 297 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 RPL9P6-201ENST00000492764 598 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 RPS6P4-201ENST00000494693 758 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 SUMO1P1-201ENST00000497904 306 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 STMN1P2-201ENST00000508435 439 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 VN1R107P-201ENST00000601784 209 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 AC010680.4-201ENST00000605334 543 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 AL365434.2-201ENST00000607979 234 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 AC090425.1-201ENST00000610007 140 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 MIR6798-201ENST00000612887 67 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 OR5H6-203ENST00000642105 978 ntBASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
BHLHA9Q7RTU4 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.4□□□□□ -1.7
BHLHA9Q7RTU4 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
BHLHA9Q7RTU4 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.4□□□□□ -1.7
BHLHA9Q7RTU4 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
BHLHA9Q7RTU4 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 RNU1-94P-201ENST00000362627 173 ntBASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 Y_RNA.263-201ENST00000364659 114 ntBASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 RNU6-738P-201ENST00000384531 106 ntBASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 RPL17P50-201ENST00000396131 546 ntBASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 AL031577.2-201ENST00000404133 280 ntBASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 AL136310.1-201ENST00000404926 654 ntBASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 AC009237.10-201ENST00000414112 510 ntBASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 AL356276.2-201ENST00000435919 558 ntBASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 AL590639.1-201ENST00000456484 337 ntBASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 AC103987.1-201ENST00000473394 348 ntBASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 AC092989.1-201ENST00000481235 277 ntBASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 RNU6-123P-201ENST00000516163 102 ntBASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 OR5AK1P-201ENST00000524837 922 ntBASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 OR7E10P-201ENST00000526420 991 ntBASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 HPRT1P3-201ENST00000539521 576 ntBASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 AC122134.1-201ENST00000565664 1104 ntBASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 MIR4675-201ENST00000577898 77 ntBASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 UBE2V2P2-201ENST00000587677 504 ntBASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 AC010928.3-201ENST00000587712 541 ntBASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 BNIP3P11-201ENST00000603878 563 ntBASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 AC010680.3-201ENST00000604215 520 ntBASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 AL050343.2-201ENST00000607338 280 ntBASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
BHLHA9Q7RTU4 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms