Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.98□□□□□ -1.77
SHFQ7M4L6 AC008507.1-201ENST00000587506 734 ntBASIC3.98□□□□□ -1.77
SHFQ7M4L6 AL031320.1-201ENST00000604177 357 ntBASIC3.98□□□□□ -1.77
SHFQ7M4L6 RNU6-88P-201ENST00000606801 100 ntBASIC3.98□□□□□ -1.77
SHFQ7M4L6 AL031775.1-201ENST00000607014 887 ntBASIC3.98□□□□□ -1.77
SHFQ7M4L6 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.98□□□□□ -1.77
SHFQ7M4L6 MIR6729-201ENST00000618194 65 ntBASIC3.98□□□□□ -1.77
SHFQ7M4L6 AC087385.3-201ENST00000620477 187 ntBASIC3.98□□□□□ -1.77
SHFQ7M4L6 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.98□□□□□ -1.77
SHFQ7M4L6 AC006065.6-201ENST00000625201 545 ntBASIC3.98□□□□□ -1.77
SHFQ7M4L6 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.98□□□□□ -1.77
SHFQ7M4L6 U6.101-201ENST00000637707 76 ntBASIC3.98□□□□□ -1.77
SHFQ7M4L6 AC006927.3-201ENST00000638789 384 ntBASIC3.98□□□□□ -1.77
SHFQ7M4L6 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.98□□□□□ -1.77
SHFQ7M4L6 ZNF962P-201ENST00000443465 3140 ntBASIC3.98□□□□□ -1.77
SHFQ7M4L6 ELL2P4-201ENST00000446870 1376 ntBASIC3.98□□□□□ -1.77
SHFQ7M4L6 DDX43P2-201ENST00000604753 1354 ntBASIC3.98□□□□□ -1.77
SHFQ7M4L6 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.98□□□□□ -1.77
SHFQ7M4L6 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SHFQ7M4L6 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
SHFQ7M4L6 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SHFQ7M4L6 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
SHFQ7M4L6 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SHFQ7M4L6 AL031985.3-201ENST00000565390 2449 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SHFQ7M4L6 AC109780.1-201ENST00000451768 1344 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SHFQ7M4L6 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SHFQ7M4L6 AP002907.1-201ENST00000606361 1430 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SHFQ7M4L6 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SHFQ7M4L6 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.97□□□□□ -1.77
SHFQ7M4L6 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.97□□□□□ -1.77
SHFQ7M4L6 RNU6-723P-201ENST00000383973 107 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 SNORD116-4-201ENST00000384733 96 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 MIR659-201ENST00000384963 97 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SHFQ7M4L6 MIR298-201ENST00000401212 88 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 AL121972.1-201ENST00000402023 252 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 HSPD1P16-201ENST00000402302 394 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 AL512430.2-201ENST00000406786 339 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 SNORA74C-2-201ENST00000411179 201 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.97□□□□□ -1.77
SHFQ7M4L6 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.97□□□□□ -1.77
SHFQ7M4L6 RPS23P10-201ENST00000416185 486 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 OR4F13P-201ENST00000428478 931 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.97□□□□□ -1.77
SHFQ7M4L6 TRIM60P18-201ENST00000441518 828 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.97□□□□□ -1.77
SHFQ7M4L6 PTMAP3-201ENST00000447474 330 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 RPL36AP33-201ENST00000450395 310 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 AC104073.1-201ENST00000451988 151 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 AC091685.2-201ENST00000454924 864 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 TRBV26-201ENST00000456572 344 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 AC004453.1-201ENST00000487895 408 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.97□□□□□ -1.77
SHFQ7M4L6 TMEM251P1-201ENST00000503717 318 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 AC139783.2-201ENST00000504847 1145 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 AC006499.5-201ENST00000505037 514 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.97□□□□□ -1.77
SHFQ7M4L6 AC016065.2-201ENST00000514530 444 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 AC104057.1-201ENST00000515547 497 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 RNU6-150P-201ENST00000516237 95 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 Y_RNA.695-201ENST00000516715 107 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 IGKV1-32-201ENST00000519290 311 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.97□□□□□ -1.77
SHFQ7M4L6 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.97□□□□□ -1.77
SHFQ7M4L6 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.97□□□□□ -1.77
SHFQ7M4L6 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC3.97□□□□□ -1.77
SHFQ7M4L6 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.97□□□□□ -1.77
SHFQ7M4L6 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.97□□□□□ -1.77
SHFQ7M4L6 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.97□□□□□ -1.77
SHFQ7M4L6 GTF2IP22-201ENST00000554443 182 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 AC084757.1-201ENST00000559987 490 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.97□□□□□ -1.77
SHFQ7M4L6 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.97□□□□□ -1.77
SHFQ7M4L6 AC091042.1-201ENST00000579213 173 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 MIR4737-201ENST00000583979 81 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 RSL24D1P11-201ENST00000591045 491 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SHFQ7M4L6 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.97□□□□□ -1.77
SHFQ7M4L6 U73023.1-201ENST00000603134 700 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 BNIP3P11-201ENST00000603878 563 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 RN7SKP299-201ENST00000606679 301 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 MIR6862-1-201ENST00000613016 70 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 MIR6862-2-201ENST00000614755 70 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 BMS1P21-201ENST00000634565 365 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
SHFQ7M4L6 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.97□□□□□ -1.77
SHFQ7M4L6 AC090971.4-201ENST00000560291 1800 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SHFQ7M4L6 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SHFQ7M4L6 ERCC6-202ENST00000374127 1782 ntBASIC3.97□□□□□ -1.77
SHFQ7M4L6 AC010928.1-201ENST00000592477 1447 ntBASIC3.96□□□□□ -1.77
SHFQ7M4L6 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
SHFQ7M4L6 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.96□□□□□ -1.78
SHFQ7M4L6 CR383658.2-201ENST00000547576 1525 ntBASIC3.96□□□□□ -1.78
SHFQ7M4L6 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SHFQ7M4L6 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms