Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
C11orf88Q6PI97 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
C11orf88Q6PI97 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.79□□□□□ -1.8
C11orf88Q6PI97 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.79□□□□□ -1.8
C11orf88Q6PI97 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
C11orf88Q6PI97 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
C11orf88Q6PI97 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
C11orf88Q6PI97 AC105074.1-201ENST00000623380 3095 ntBASIC3.79□□□□□ -1.8
C11orf88Q6PI97 MFSD8-216ENST00000641147 4009 ntBASIC3.79□□□□□ -1.8
C11orf88Q6PI97 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
C11orf88Q6PI97 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.78□□□□□ -1.8
C11orf88Q6PI97 MTND4P34-201ENST00000572715 1371 ntBASIC3.78□□□□□ -1.8
C11orf88Q6PI97 OR56B2P-202ENST00000641377 2453 ntBASIC3.78□□□□□ -1.8
C11orf88Q6PI97 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
C11orf88Q6PI97 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
C11orf88Q6PI97 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
C11orf88Q6PI97 RNA5SP307-201ENST00000362863 116 ntBASIC3.78□□□□□ -1.8
C11orf88Q6PI97 RNA5SP505-201ENST00000364748 108 ntBASIC3.78□□□□□ -1.8
C11orf88Q6PI97 SNORA70F-201ENST00000384142 135 ntBASIC3.78□□□□□ -1.8
C11orf88Q6PI97 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
C11orf88Q6PI97 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.78□□□□□ -1.8
C11orf88Q6PI97 RPL21P109-201ENST00000422213 475 ntBASIC3.78□□□□□ -1.8
C11orf88Q6PI97 RBMY1KP-201ENST00000423480 476 ntBASIC3.78□□□□□ -1.8
C11orf88Q6PI97 C4BPAP2-201ENST00000428434 478 ntBASIC3.78□□□□□ -1.8
C11orf88Q6PI97 MTCYBP31-201ENST00000438855 1122 ntBASIC3.78□□□□□ -1.8
C11orf88Q6PI97 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.78□□□□□ -1.8
C11orf88Q6PI97 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.78□□□□□ -1.8
C11orf88Q6PI97 RPL23AP31-201ENST00000456160 467 ntBASIC3.78□□□□□ -1.8
C11orf88Q6PI97 AC079804.1-201ENST00000461922 436 ntBASIC3.78□□□□□ -1.8
C11orf88Q6PI97 RN7SL354P-201ENST00000469282 294 ntBASIC3.78□□□□□ -1.8
C11orf88Q6PI97 RPS23P3-201ENST00000470993 430 ntBASIC3.78□□□□□ -1.8
C11orf88Q6PI97 SETP14-201ENST00000497538 873 ntBASIC3.78□□□□□ -1.8
C11orf88Q6PI97 AC096751.1-202ENST00000502691 1067 ntBASIC3.78□□□□□ -1.8
C11orf88Q6PI97 MTND3P3-201ENST00000505004 126 ntBASIC3.78□□□□□ -1.8
C11orf88Q6PI97 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.78□□□□□ -1.8
C11orf88Q6PI97 AC111000.3-201ENST00000508057 576 ntBASIC3.78□□□□□ -1.8
C11orf88Q6PI97 AC091868.1-201ENST00000508746 304 ntBASIC3.78□□□□□ -1.8
C11orf88Q6PI97 AC109458.1-201ENST00000508858 316 ntBASIC3.78□□□□□ -1.8
C11orf88Q6PI97 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.78□□□□□ -1.8
C11orf88Q6PI97 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.78□□□□□ -1.8
C11orf88Q6PI97 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.78□□□□□ -1.8
C11orf88Q6PI97 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.78□□□□□ -1.8
C11orf88Q6PI97 AP001636.2-201ENST00000525517 696 ntBASIC3.78□□□□□ -1.8
C11orf88Q6PI97 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.78□□□□□ -1.8
C11orf88Q6PI97 FAM60BP-201ENST00000578364 658 ntBASIC3.78□□□□□ -1.8
C11orf88Q6PI97 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
C11orf88Q6PI97 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.78□□□□□ -1.8
C11orf88Q6PI97 AC010201.1-201ENST00000605051 540 ntBASIC3.78□□□□□ -1.8
C11orf88Q6PI97 AC069545.1-201ENST00000605671 358 ntBASIC3.78□□□□□ -1.8
C11orf88Q6PI97 AC024060.1-201ENST00000607052 494 ntBASIC3.78□□□□□ -1.8
C11orf88Q6PI97 AL109620.1-201ENST00000618738 1197 ntBASIC3.78□□□□□ -1.8
C11orf88Q6PI97 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.78□□□□□ -1.8
C11orf88Q6PI97 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.78□□□□□ -1.8
C11orf88Q6PI97 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
C11orf88Q6PI97 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
C11orf88Q6PI97 AL353746.1-201ENST00000566293 6881 ntBASIC3.78□□□□□ -1.8
C11orf88Q6PI97 AC135352.1-201ENST00000506173 1418 ntBASIC3.78□□□□□ -1.8
C11orf88Q6PI97 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
C11orf88Q6PI97 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
C11orf88Q6PI97 AC116096.1-201ENST00000566804 2314 ntBASIC3.77□□□□□ -1.81
C11orf88Q6PI97 MTND4P9-201ENST00000507819 1346 ntBASIC3.77□□□□□ -1.81
C11orf88Q6PI97 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
C11orf88Q6PI97 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.77□□□□□ -1.81
C11orf88Q6PI97 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.77□□□□□ -1.81
C11orf88Q6PI97 SNORD113.2-201ENST00000364166 89 ntBASIC3.77□□□□□ -1.81
C11orf88Q6PI97 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.77□□□□□ -1.81
C11orf88Q6PI97 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.77□□□□□ -1.81
C11orf88Q6PI97 YPEL5P1-201ENST00000419731 367 ntBASIC3.77□□□□□ -1.81
C11orf88Q6PI97 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.77□□□□□ -1.81
C11orf88Q6PI97 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.77□□□□□ -1.81
C11orf88Q6PI97 RPS27AP7-201ENST00000422792 455 ntBASIC3.77□□□□□ -1.81
C11orf88Q6PI97 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.77□□□□□ -1.81
C11orf88Q6PI97 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.77□□□□□ -1.81
C11orf88Q6PI97 AL132765.1-201ENST00000434165 553 ntBASIC3.77□□□□□ -1.81
C11orf88Q6PI97 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.77□□□□□ -1.81
C11orf88Q6PI97 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.77□□□□□ -1.81
C11orf88Q6PI97 RFC5P1-201ENST00000454419 874 ntBASIC3.77□□□□□ -1.81
C11orf88Q6PI97 RPS23P7-201ENST00000466210 444 ntBASIC3.77□□□□□ -1.81
C11orf88Q6PI97 ST13P14-201ENST00000474095 734 ntBASIC3.77□□□□□ -1.81
C11orf88Q6PI97 AC017015.1-201ENST00000477387 286 ntBASIC3.77□□□□□ -1.81
C11orf88Q6PI97 PRELID3BP6-201ENST00000503839 571 ntBASIC3.77□□□□□ -1.81
C11orf88Q6PI97 RNU6-1225P-201ENST00000516336 65 ntBASIC3.77□□□□□ -1.81
C11orf88Q6PI97 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
C11orf88Q6PI97 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.77□□□□□ -1.81
C11orf88Q6PI97 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.77□□□□□ -1.81
C11orf88Q6PI97 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.77□□□□□ -1.81
C11orf88Q6PI97 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.77□□□□□ -1.81
C11orf88Q6PI97 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.77□□□□□ -1.81
C11orf88Q6PI97 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.77□□□□□ -1.81
C11orf88Q6PI97 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.77□□□□□ -1.81
C11orf88Q6PI97 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.77□□□□□ -1.81
C11orf88Q6PI97 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.77□□□□□ -1.81
C11orf88Q6PI97 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.77□□□□□ -1.81
C11orf88Q6PI97 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.77□□□□□ -1.81
C11orf88Q6PI97 VN1R83P-201ENST00000595685 445 ntBASIC3.77□□□□□ -1.81
C11orf88Q6PI97 BPIFA4P-203ENST00000603168 689 ntBASIC3.77□□□□□ -1.81
C11orf88Q6PI97 AC006254.3-201ENST00000603353 884 ntBASIC3.77□□□□□ -1.81
C11orf88Q6PI97 AL365400.2-201ENST00000605604 902 ntBASIC3.77□□□□□ -1.81
C11orf88Q6PI97 AC097504.2-201ENST00000608088 454 ntBASIC3.77□□□□□ -1.81
C11orf88Q6PI97 MIR378J-201ENST00000611988 109 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms