Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CCDC58Q4VC31 TANK-205ENST00000405852 2155 ntTSL 5 BASIC2.84□□□□□ -1.96
CCDC58Q4VC31 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CCDC58Q4VC31 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.84□□□□□ -1.96
CCDC58Q4VC31 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.84□□□□□ -1.96
CCDC58Q4VC31 HSPA8P19-201ENST00000505359 1517 ntBASIC2.83□□□□□ -1.96
CCDC58Q4VC31 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC58Q4VC31 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CCDC58Q4VC31 RNU1-109P-201ENST00000383960 147 ntBASIC2.83□□□□□ -1.96
CCDC58Q4VC31 RPL31P1-201ENST00000398116 372 ntBASIC2.83□□□□□ -1.96
CCDC58Q4VC31 RNA5SP492-201ENST00000411330 114 ntBASIC2.83□□□□□ -1.96
CCDC58Q4VC31 AC109780.2-201ENST00000413467 845 ntBASIC2.83□□□□□ -1.96
CCDC58Q4VC31 RPA2P2-201ENST00000419698 796 ntBASIC2.83□□□□□ -1.96
CCDC58Q4VC31 RSL24D1P6-201ENST00000426934 401 ntBASIC2.83□□□□□ -1.96
CCDC58Q4VC31 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC58Q4VC31 CKS1BP5-201ENST00000434172 273 ntBASIC2.83□□□□□ -1.96
CCDC58Q4VC31 RPL23AP58-201ENST00000440453 469 ntBASIC2.83□□□□□ -1.96
CCDC58Q4VC31 RPS12P18-201ENST00000442381 270 ntBASIC2.83□□□□□ -1.96
CCDC58Q4VC31 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC58Q4VC31 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.83□□□□□ -1.96
CCDC58Q4VC31 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC58Q4VC31 AC110792.2-201ENST00000510278 224 ntBASIC2.83□□□□□ -1.96
CCDC58Q4VC31 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC58Q4VC31 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC58Q4VC31 GMPSP1-201ENST00000514075 579 ntBASIC2.83□□□□□ -1.96
CCDC58Q4VC31 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC58Q4VC31 OR8L1P-201ENST00000534005 955 ntBASIC2.83□□□□□ -1.96
CCDC58Q4VC31 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC58Q4VC31 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC58Q4VC31 AC234775.3-201ENST00000564612 656 ntBASIC2.83□□□□□ -1.96
CCDC58Q4VC31 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC2.83□□□□□ -1.96
CCDC58Q4VC31 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC58Q4VC31 SNORD84-203ENST00000584275 78 ntBASIC2.83□□□□□ -1.96
CCDC58Q4VC31 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.83□□□□□ -1.96
CCDC58Q4VC31 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC58Q4VC31 AC023043.3-201ENST00000593113 385 ntBASIC2.83□□□□□ -1.96
CCDC58Q4VC31 AC113194.1-201ENST00000606037 500 ntBASIC2.83□□□□□ -1.96
CCDC58Q4VC31 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.83□□□□□ -1.96
CCDC58Q4VC31 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.83□□□□□ -1.96
CCDC58Q4VC31 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.83□□□□□ -1.96
CCDC58Q4VC31 AL161912.2-201ENST00000565707 3007 ntBASIC2.83□□□□□ -1.96
CCDC58Q4VC31 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.83□□□□□ -1.96
CCDC58Q4VC31 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC58Q4VC31 RNU4-35P-201ENST00000362588 141 ntBASIC2.82□□□□□ -1.96
CCDC58Q4VC31 SNORA70.2-201ENST00000364506 135 ntBASIC2.82□□□□□ -1.96
CCDC58Q4VC31 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC58Q4VC31 EIF5P1-201ENST00000400019 1231 ntBASIC2.82□□□□□ -1.96
CCDC58Q4VC31 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC58Q4VC31 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC58Q4VC31 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC58Q4VC31 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC58Q4VC31 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC58Q4VC31 RPL21P66-201ENST00000426566 466 ntBASIC2.82□□□□□ -1.96
CCDC58Q4VC31 AL031736.2-201ENST00000426573 787 ntBASIC2.82□□□□□ -1.96
CCDC58Q4VC31 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC58Q4VC31 AC122718.1-201ENST00000439448 744 ntBASIC2.82□□□□□ -1.96
CCDC58Q4VC31 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC58Q4VC31 UBBP3-201ENST00000445497 241 ntBASIC2.82□□□□□ -1.96
CCDC58Q4VC31 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.82□□□□□ -1.96
CCDC58Q4VC31 AC025518.1-201ENST00000479856 347 ntBASIC2.82□□□□□ -1.96
CCDC58Q4VC31 RPL21P13-201ENST00000488305 481 ntBASIC2.82□□□□□ -1.96
CCDC58Q4VC31 AP001025.2-201ENST00000490908 477 ntBASIC2.82□□□□□ -1.96
CCDC58Q4VC31 RPL21P131-201ENST00000497298 483 ntBASIC2.82□□□□□ -1.96
CCDC58Q4VC31 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.82□□□□□ -1.96
CCDC58Q4VC31 NPM1P52-201ENST00000518264 846 ntBASIC2.82□□□□□ -1.96
CCDC58Q4VC31 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC58Q4VC31 AADACP1-206ENST00000561502 1193 ntBASIC2.82□□□□□ -1.96
CCDC58Q4VC31 AC136624.4-201ENST00000573044 370 ntBASIC2.82□□□□□ -1.96
CCDC58Q4VC31 AC090616.5-202ENST00000582111 297 ntBASIC2.82□□□□□ -1.96
CCDC58Q4VC31 AC073657.2-201ENST00000605661 303 ntBASIC2.82□□□□□ -1.96
CCDC58Q4VC31 U3.45-201ENST00000607547 219 ntBASIC2.82□□□□□ -1.96
CCDC58Q4VC31 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC58Q4VC31 AC083809.1-201ENST00000615051 472 ntBASIC2.82□□□□□ -1.96
CCDC58Q4VC31 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC58Q4VC31 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC58Q4VC31 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC58Q4VC31 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC58Q4VC31 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.81□□□□□ -1.96
CCDC58Q4VC31 AC233263.6-201ENST00000631132 1963 ntBASIC2.81□□□□□ -1.96
CCDC58Q4VC31 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC58Q4VC31 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC58Q4VC31 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC58Q4VC31 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CCDC58Q4VC31 RNU6-697P-201ENST00000363348 107 ntBASIC2.81□□□□□ -1.96
CCDC58Q4VC31 SNORD56.5-201ENST00000364281 72 ntBASIC2.81□□□□□ -1.96
CCDC58Q4VC31 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC58Q4VC31 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC58Q4VC31 AL359837.1-201ENST00000381357 287 ntBASIC2.81□□□□□ -1.96
CCDC58Q4VC31 HMGN2P35-201ENST00000412164 270 ntBASIC2.81□□□□□ -1.96
CCDC58Q4VC31 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.81□□□□□ -1.96
CCDC58Q4VC31 ELOCP11-201ENST00000436690 332 ntBASIC2.81□□□□□ -1.96
CCDC58Q4VC31 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC58Q4VC31 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.81□□□□□ -1.96
CCDC58Q4VC31 ELOCP16-201ENST00000444494 332 ntBASIC2.81□□□□□ -1.96
CCDC58Q4VC31 ARL5AP2-201ENST00000444698 533 ntBASIC2.81□□□□□ -1.96
CCDC58Q4VC31 AC069540.1-201ENST00000446320 988 ntBASIC2.81□□□□□ -1.96
CCDC58Q4VC31 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC58Q4VC31 RPL21P10-201ENST00000463521 490 ntBASIC2.81□□□□□ -1.96
CCDC58Q4VC31 AC106707.2-201ENST00000484182 374 ntBASIC2.81□□□□□ -1.96
CCDC58Q4VC31 AIG1P1-201ENST00000503376 148 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms