Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 USP9YP14-201ENST00000430663 563 ntBASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 PRELID3BP10-201ENST00000431957 584 ntBASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 Z74696.2-201ENST00000436514 498 ntBASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 AC105402.2-201ENST00000438503 358 ntBASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 AC010326.1-201ENST00000462726 602 ntBASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 MTND6P6-201ENST00000478031 263 ntBASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 AP000797.1-201ENST00000478870 387 ntBASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 AC025164.1-201ENST00000496249 478 ntBASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 POU5F1P7-201ENST00000508759 541 ntBASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 IGKV1-32-201ENST00000519290 311 ntBASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 AC010546.1-201ENST00000569391 485 ntBASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 AC209154.1-201ENST00000582156 337 ntBASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 AC005771.1-201ENST00000585581 349 ntBASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 AP003465.2-201ENST00000602571 373 ntBASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 AL021997.1-201ENST00000605757 193 ntBASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 COX6CP4-201ENST00000605798 228 ntBASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 Z99129.1-201ENST00000612510 255 ntBASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 AC018755.4-201ENST00000619715 454 ntBASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 U6.101-201ENST00000637707 76 ntBASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.56□□□□□ -1.68
PTCHD3Q3KNS1 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 RNU5F-7P-201ENST00000363696 115 ntBASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 Y_RNA.359-201ENST00000365498 102 ntBASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 ARF4P3-201ENST00000397387 509 ntBASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 AC025750.1-201ENST00000399891 379 ntBASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 AL121972.1-201ENST00000402023 252 ntBASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 MIR1305-201ENST00000408300 86 ntBASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 COX6CP17-201ENST00000421389 185 ntBASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 RPL37P21-201ENST00000435890 276 ntBASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 EIF4A1P11-201ENST00000451239 222 ntBASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 AL445433.1-201ENST00000457507 257 ntBASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 RNU7-136P-201ENST00000458819 69 ntBASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 snoU13.7-201ENST00000459220 104 ntBASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 AP000942.1-201ENST00000463969 747 ntBASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 AC090142.1-201ENST00000465776 462 ntBASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 RPL7P22-201ENST00000466005 733 ntBASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 AC090453.1-201ENST00000495560 436 ntBASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 OR51K1P-201ENST00000510214 950 ntBASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 FABP5P5-201ENST00000515537 406 ntBASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 AP004247.1-201ENST00000531556 1289 ntBASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 AGGF1P8-201ENST00000562979 1000 ntBASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 MIR4716-201ENST00000579628 84 ntBASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 NDUFA8P1-201ENST00000605525 367 ntBASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 MIR378J-201ENST00000611988 109 ntBASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 AC005332.10-201ENST00000612725 619 ntBASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 SAGE2P-201ENST00000420011 2126 ntBASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 AC015813.6-201ENST00000624409 5808 ntBASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 MFSD8-216ENST00000641147 4009 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms