Protein–RNA interactions for Protein: Q15818

NPTX1, Neuronal pentraxin-1, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX1Q15818 RPS4XP9-201ENST00000405151 780 ntBASIC3.81□□□□□ -1.8
NPTX1Q15818 RNA5SP80-201ENST00000410475 111 ntBASIC3.81□□□□□ -1.8
NPTX1Q15818 RN7SKP177-201ENST00000410567 355 ntBASIC3.81□□□□□ -1.8
NPTX1Q15818 AC016397.1-201ENST00000412463 242 ntBASIC3.81□□□□□ -1.8
NPTX1Q15818 AL133384.1-201ENST00000412744 351 ntBASIC3.81□□□□□ -1.8
NPTX1Q15818 PGBD4P8-201ENST00000412993 562 ntBASIC3.81□□□□□ -1.8
NPTX1Q15818 RPL31P2-201ENST00000413849 377 ntBASIC3.81□□□□□ -1.8
NPTX1Q15818 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.81□□□□□ -1.8
NPTX1Q15818 RPL31P54-201ENST00000429803 370 ntBASIC3.81□□□□□ -1.8
NPTX1Q15818 RPS29P17-201ENST00000430795 166 ntBASIC3.81□□□□□ -1.8
NPTX1Q15818 CKS1BP5-201ENST00000434172 273 ntBASIC3.81□□□□□ -1.8
NPTX1Q15818 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.81□□□□□ -1.8
NPTX1Q15818 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.81□□□□□ -1.8
NPTX1Q15818 RPL29P29-201ENST00000448725 423 ntBASIC3.81□□□□□ -1.8
NPTX1Q15818 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.81□□□□□ -1.8
NPTX1Q15818 OFD1P3Y-201ENST00000453312 783 ntBASIC3.81□□□□□ -1.8
NPTX1Q15818 RPL36AP13-201ENST00000457490 317 ntBASIC3.81□□□□□ -1.8
NPTX1Q15818 USP9YP25-201ENST00000457708 443 ntBASIC3.81□□□□□ -1.8
NPTX1Q15818 RPL23AP24-201ENST00000458203 385 ntBASIC3.81□□□□□ -1.8
NPTX1Q15818 snoU13.1-201ENST00000459157 104 ntBASIC3.81□□□□□ -1.8
NPTX1Q15818 RPL5P24-201ENST00000463742 885 ntBASIC3.81□□□□□ -1.8
NPTX1Q15818 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.81□□□□□ -1.8
NPTX1Q15818 AF213884.1-201ENST00000488102 463 ntBASIC3.81□□□□□ -1.8
NPTX1Q15818 BTF3L4P4-201ENST00000506381 449 ntBASIC3.81□□□□□ -1.8
NPTX1Q15818 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.81□□□□□ -1.8
NPTX1Q15818 MTCYBP37-201ENST00000510642 1133 ntBASIC3.81□□□□□ -1.8
NPTX1Q15818 AC008958.1-201ENST00000511047 682 ntBASIC3.81□□□□□ -1.8
NPTX1Q15818 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.81□□□□□ -1.8
NPTX1Q15818 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.81□□□□□ -1.8
NPTX1Q15818 OR4A45P-201ENST00000529954 901 ntBASIC3.81□□□□□ -1.8
NPTX1Q15818 AC090502.2-201ENST00000549267 280 ntBASIC3.81□□□□□ -1.8
NPTX1Q15818 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.81□□□□□ -1.8
NPTX1Q15818 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.81□□□□□ -1.8
NPTX1Q15818 TRAV15-201ENST00000556680 249 ntBASIC3.81□□□□□ -1.8
NPTX1Q15818 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.81□□□□□ -1.8
NPTX1Q15818 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.81□□□□□ -1.8
NPTX1Q15818 AC022655.2-201ENST00000577280 318 ntBASIC3.81□□□□□ -1.8
NPTX1Q15818 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.81□□□□□ -1.8
NPTX1Q15818 AC107982.3-201ENST00000584957 985 ntBASIC3.81□□□□□ -1.8
NPTX1Q15818 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.81□□□□□ -1.8
NPTX1Q15818 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.81□□□□□ -1.8
NPTX1Q15818 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.81□□□□□ -1.8
NPTX1Q15818 BNIP3P26-201ENST00000600827 554 ntBASIC3.81□□□□□ -1.8
NPTX1Q15818 AC091057.2-201ENST00000602594 792 ntBASIC3.81□□□□□ -1.8
NPTX1Q15818 MRPS35P3-201ENST00000603189 709 ntBASIC3.81□□□□□ -1.8
NPTX1Q15818 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.81□□□□□ -1.8
NPTX1Q15818 AC007349.4-201ENST00000608114 532 ntBASIC3.81□□□□□ -1.8
NPTX1Q15818 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.81□□□□□ -1.8
NPTX1Q15818 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.81□□□□□ -1.8
NPTX1Q15818 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
NPTX1Q15818 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.81□□□□□ -1.8
NPTX1Q15818 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPTX1Q15818 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPTX1Q15818 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.8□□□□□ -1.8
NPTX1Q15818 NCAPGP1-201ENST00000505112 1814 ntBASIC3.8□□□□□ -1.8
NPTX1Q15818 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
NPTX1Q15818 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NPTX1Q15818 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NPTX1Q15818 MIR192-201ENST00000384915 110 ntBASIC3.8□□□□□ -1.8
NPTX1Q15818 TAF9BP1-201ENST00000396646 746 ntBASIC3.8□□□□□ -1.8
NPTX1Q15818 ELOCP19-201ENST00000411919 318 ntBASIC3.8□□□□□ -1.8
NPTX1Q15818 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.8□□□□□ -1.8
NPTX1Q15818 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.8□□□□□ -1.8
NPTX1Q15818 PTP4A1P5-201ENST00000420305 455 ntBASIC3.8□□□□□ -1.8
NPTX1Q15818 MTCO2P25-201ENST00000447065 681 ntBASIC3.8□□□□□ -1.8
NPTX1Q15818 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.8□□□□□ -1.8
NPTX1Q15818 PPIAP3-201ENST00000450588 505 ntBASIC3.8□□□□□ -1.8
NPTX1Q15818 AC104073.1-201ENST00000451988 151 ntBASIC3.8□□□□□ -1.8
NPTX1Q15818 VN1R40P-201ENST00000455196 941 ntBASIC3.8□□□□□ -1.8
NPTX1Q15818 RPS29P33-201ENST00000456717 146 ntBASIC3.8□□□□□ -1.8
NPTX1Q15818 RN7SL860P-201ENST00000473738 223 ntBASIC3.8□□□□□ -1.8
NPTX1Q15818 OR4G11P-201ENST00000492842 939 ntBASIC3.8□□□□□ -1.8
NPTX1Q15818 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.8□□□□□ -1.8
NPTX1Q15818 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.8□□□□□ -1.8
NPTX1Q15818 SETP14-201ENST00000497538 873 ntBASIC3.8□□□□□ -1.8
NPTX1Q15818 KLRA1P-201ENST00000503499 986 ntBASIC3.8□□□□□ -1.8
NPTX1Q15818 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.8□□□□□ -1.8
NPTX1Q15818 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.8□□□□□ -1.8
NPTX1Q15818 AC005798.1-201ENST00000513715 387 ntBASIC3.8□□□□□ -1.8
NPTX1Q15818 IGKV2-23-201ENST00000518729 323 ntBASIC3.8□□□□□ -1.8
NPTX1Q15818 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.8□□□□□ -1.8
NPTX1Q15818 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.8□□□□□ -1.8
NPTX1Q15818 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.8□□□□□ -1.8
NPTX1Q15818 AC008127.2-201ENST00000549925 1075 ntBASIC3.8□□□□□ -1.8
NPTX1Q15818 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.8□□□□□ -1.8
NPTX1Q15818 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.8□□□□□ -1.8
NPTX1Q15818 AC022662.1-201ENST00000580252 331 ntBASIC3.8□□□□□ -1.8
NPTX1Q15818 OR4G1P-201ENST00000588632 938 ntBASIC3.8□□□□□ -1.8
NPTX1Q15818 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.8□□□□□ -1.8
NPTX1Q15818 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.8□□□□□ -1.8
NPTX1Q15818 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.8□□□□□ -1.8
NPTX1Q15818 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.8□□□□□ -1.8
NPTX1Q15818 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.8□□□□□ -1.8
NPTX1Q15818 AC234772.3-201ENST00000602277 528 ntBASIC3.8□□□□□ -1.8
NPTX1Q15818 AL161729.3-201ENST00000603533 673 ntBASIC3.8□□□□□ -1.8
NPTX1Q15818 AC104662.1-201ENST00000604448 511 ntBASIC3.8□□□□□ -1.8
NPTX1Q15818 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.8□□□□□ -1.8
NPTX1Q15818 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.8□□□□□ -1.8
NPTX1Q15818 AC069209.1-201ENST00000619282 651 ntBASIC3.8□□□□□ -1.8
NPTX1Q15818 AC109809.1-201ENST00000619665 545 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 256.1 ms