Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SCN1BQ07699 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SCN1BQ07699 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.75□□□□□ -1.81
SCN1BQ07699 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SCN1BQ07699 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.74□□□□□ -1.81
SCN1BQ07699 RPS4XP5-202ENST00000449995 1334 ntBASIC3.74□□□□□ -1.81
SCN1BQ07699 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SCN1BQ07699 SNORD51-201ENST00000384320 80 ntBASIC3.74□□□□□ -1.81
SCN1BQ07699 MIR659-201ENST00000384963 97 ntBASIC3.74□□□□□ -1.81
SCN1BQ07699 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.74□□□□□ -1.81
SCN1BQ07699 SDHCP2-201ENST00000398565 501 ntBASIC3.74□□□□□ -1.81
SCN1BQ07699 AL136310.1-201ENST00000404926 654 ntBASIC3.74□□□□□ -1.81
SCN1BQ07699 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.74□□□□□ -1.81
SCN1BQ07699 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.74□□□□□ -1.81
SCN1BQ07699 AC127526.1-201ENST00000417526 366 ntBASIC3.74□□□□□ -1.81
SCN1BQ07699 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.74□□□□□ -1.81
SCN1BQ07699 MTCO2P23-201ENST00000425216 680 ntBASIC3.74□□□□□ -1.81
SCN1BQ07699 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SCN1BQ07699 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.74□□□□□ -1.81
SCN1BQ07699 AL590103.1-201ENST00000434488 307 ntBASIC3.74□□□□□ -1.81
SCN1BQ07699 MTND4LP10-201ENST00000435146 291 ntBASIC3.74□□□□□ -1.81
SCN1BQ07699 RPL23AP74-201ENST00000437246 471 ntBASIC3.74□□□□□ -1.81
SCN1BQ07699 UBE2V1P3-201ENST00000439651 417 ntBASIC3.74□□□□□ -1.81
SCN1BQ07699 AL589880.1-201ENST00000448271 287 ntBASIC3.74□□□□□ -1.81
SCN1BQ07699 RPL7P52-201ENST00000449200 742 ntBASIC3.74□□□□□ -1.81
SCN1BQ07699 AL162591.2-201ENST00000449634 317 ntBASIC3.74□□□□□ -1.81
SCN1BQ07699 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.74□□□□□ -1.81
SCN1BQ07699 FABP3P2-201ENST00000453169 399 ntBASIC3.74□□□□□ -1.81
SCN1BQ07699 PTGES3P5-201ENST00000455109 434 ntBASIC3.74□□□□□ -1.81
SCN1BQ07699 AC010326.1-201ENST00000462726 602 ntBASIC3.74□□□□□ -1.81
SCN1BQ07699 AC053481.1-201ENST00000467217 306 ntBASIC3.74□□□□□ -1.81
SCN1BQ07699 RN7SL826P-201ENST00000479724 288 ntBASIC3.74□□□□□ -1.81
SCN1BQ07699 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.74□□□□□ -1.81
SCN1BQ07699 AC105233.1-201ENST00000498840 781 ntBASIC3.74□□□□□ -1.81
SCN1BQ07699 MTCYBP17-201ENST00000503579 789 ntBASIC3.74□□□□□ -1.81
SCN1BQ07699 AC010625.1-201ENST00000511296 403 ntBASIC3.74□□□□□ -1.81
SCN1BQ07699 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.74□□□□□ -1.81
SCN1BQ07699 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.74□□□□□ -1.81
SCN1BQ07699 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.74□□□□□ -1.81
SCN1BQ07699 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.74□□□□□ -1.81
SCN1BQ07699 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.74□□□□□ -1.81
SCN1BQ07699 AC023813.2-201ENST00000564321 469 ntBASIC3.74□□□□□ -1.81
SCN1BQ07699 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.74□□□□□ -1.81
SCN1BQ07699 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.74□□□□□ -1.81
SCN1BQ07699 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.74□□□□□ -1.81
SCN1BQ07699 MIR4637-201ENST00000582405 84 ntBASIC3.74□□□□□ -1.81
SCN1BQ07699 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.74□□□□□ -1.81
SCN1BQ07699 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.74□□□□□ -1.81
SCN1BQ07699 AC011468.4-201ENST00000603942 409 ntBASIC3.74□□□□□ -1.81
SCN1BQ07699 AC010738.1-201ENST00000604970 987 ntBASIC3.74□□□□□ -1.81
SCN1BQ07699 AP002907.1-201ENST00000606361 1430 ntBASIC3.74□□□□□ -1.81
SCN1BQ07699 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.74□□□□□ -1.81
SCN1BQ07699 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.74□□□□□ -1.81
SCN1BQ07699 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.74□□□□□ -1.81
SCN1BQ07699 AC244205.2-202ENST00000635781 342 ntBASIC3.74□□□□□ -1.81
SCN1BQ07699 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SCN1BQ07699 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.74□□□□□ -1.81
SCN1BQ07699 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
SCN1BQ07699 AC024560.2-201ENST00000507981 1497 ntBASIC3.73□□□□□ -1.81
SCN1BQ07699 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SCN1BQ07699 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SCN1BQ07699 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
SCN1BQ07699 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.73□□□□□ -1.81
SCN1BQ07699 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
SCN1BQ07699 RNU6-1074P-201ENST00000383995 104 ntBASIC3.73□□□□□ -1.81
SCN1BQ07699 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.73□□□□□ -1.81
SCN1BQ07699 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SCN1BQ07699 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.73□□□□□ -1.81
SCN1BQ07699 RNA5SP129-201ENST00000410276 118 ntBASIC3.73□□□□□ -1.81
SCN1BQ07699 AL772161.1-201ENST00000439130 476 ntBASIC3.73□□□□□ -1.81
SCN1BQ07699 RRM2P4-201ENST00000441721 562 ntBASIC3.73□□□□□ -1.81
SCN1BQ07699 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.73□□□□□ -1.81
SCN1BQ07699 AC007327.1-201ENST00000447461 264 ntBASIC3.73□□□□□ -1.81
SCN1BQ07699 AC005297.2-201ENST00000450430 606 ntBASIC3.73□□□□□ -1.81
SCN1BQ07699 ZNF886P-201ENST00000450781 723 ntBASIC3.73□□□□□ -1.81
SCN1BQ07699 TRGVB-201ENST00000453257 471 ntBASIC3.73□□□□□ -1.81
SCN1BQ07699 AC005410.1-202ENST00000460347 485 ntBASIC3.73□□□□□ -1.81
SCN1BQ07699 RPL21P104-201ENST00000464143 478 ntBASIC3.73□□□□□ -1.81
SCN1BQ07699 RPL7P1-201ENST00000468161 747 ntBASIC3.73□□□□□ -1.81
SCN1BQ07699 RPL21P126-201ENST00000470049 478 ntBASIC3.73□□□□□ -1.81
SCN1BQ07699 AC096751.1-202ENST00000502691 1067 ntBASIC3.73□□□□□ -1.81
SCN1BQ07699 TMEM251P1-201ENST00000503717 318 ntBASIC3.73□□□□□ -1.81
SCN1BQ07699 BTF3L4P4-201ENST00000506381 449 ntBASIC3.73□□□□□ -1.81
SCN1BQ07699 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.73□□□□□ -1.81
SCN1BQ07699 AC114322.1-201ENST00000506771 926 ntBASIC3.73□□□□□ -1.81
SCN1BQ07699 ATP1B1P1-201ENST00000509767 915 ntBASIC3.73□□□□□ -1.81
SCN1BQ07699 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.73□□□□□ -1.81
SCN1BQ07699 IGKV2D-19-201ENST00000523346 262 ntBASIC3.73□□□□□ -1.81
SCN1BQ07699 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.73□□□□□ -1.81
SCN1BQ07699 AP000619.3-201ENST00000535634 1127 ntBASIC3.73□□□□□ -1.81
SCN1BQ07699 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.73□□□□□ -1.81
SCN1BQ07699 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.73□□□□□ -1.81
SCN1BQ07699 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.73□□□□□ -1.81
SCN1BQ07699 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.73□□□□□ -1.81
SCN1BQ07699 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.73□□□□□ -1.81
SCN1BQ07699 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SCN1BQ07699 AC009101.1-201ENST00000568135 242 ntBASIC3.73□□□□□ -1.81
SCN1BQ07699 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.73□□□□□ -1.81
SCN1BQ07699 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.73□□□□□ -1.81
SCN1BQ07699 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms