Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.93□□□□□ -1.94
H3F3AP84243 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
H3F3AP84243 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC2.93□□□□□ -1.94
H3F3AP84243 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
H3F3AP84243 RNA5SP72-201ENST00000364442 117 ntBASIC2.93□□□□□ -1.94
H3F3AP84243 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
H3F3AP84243 GSTA12P-201ENST00000402398 508 ntBASIC2.93□□□□□ -1.94
H3F3AP84243 HNRNPDP2-201ENST00000406475 478 ntBASIC2.93□□□□□ -1.94
H3F3AP84243 RPL26P37-201ENST00000411983 438 ntBASIC2.93□□□□□ -1.94
H3F3AP84243 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC2.93□□□□□ -1.94
H3F3AP84243 AC005300.1-201ENST00000428401 373 ntBASIC2.93□□□□□ -1.94
H3F3AP84243 MTCO1P45-201ENST00000431457 267 ntBASIC2.93□□□□□ -1.94
H3F3AP84243 HMGB3P11-201ENST00000440127 604 ntBASIC2.93□□□□□ -1.94
H3F3AP84243 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.93□□□□□ -1.94
H3F3AP84243 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.93□□□□□ -1.94
H3F3AP84243 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.93□□□□□ -1.94
H3F3AP84243 RPL23AP55-201ENST00000498163 452 ntBASIC2.93□□□□□ -1.94
H3F3AP84243 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
H3F3AP84243 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.93□□□□□ -1.94
H3F3AP84243 AC067904.2-201ENST00000517322 1283 ntBASIC2.93□□□□□ -1.94
H3F3AP84243 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.93□□□□□ -1.94
H3F3AP84243 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.93□□□□□ -1.94
H3F3AP84243 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.93□□□□□ -1.94
H3F3AP84243 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC2.93□□□□□ -1.94
H3F3AP84243 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.93□□□□□ -1.94
H3F3AP84243 AC009464.1-201ENST00000615731 469 ntBASIC2.93□□□□□ -1.94
H3F3AP84243 AL590410.1-201ENST00000617925 333 ntBASIC2.93□□□□□ -1.94
H3F3AP84243 AC019080.5-201ENST00000624891 757 ntBASIC2.93□□□□□ -1.94
H3F3AP84243 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.93□□□□□ -1.94
H3F3AP84243 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
H3F3AP84243 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
H3F3AP84243 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
H3F3AP84243 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.93□□□□□ -1.94
H3F3AP84243 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
H3F3AP84243 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
H3F3AP84243 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.92□□□□□ -1.94
H3F3AP84243 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.92□□□□□ -1.94
H3F3AP84243 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.92□□□□□ -1.94
H3F3AP84243 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
H3F3AP84243 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
H3F3AP84243 RNA5SP267-201ENST00000364893 126 ntBASIC2.92□□□□□ -1.94
H3F3AP84243 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.92□□□□□ -1.94
H3F3AP84243 AL583834.1-201ENST00000406943 343 ntBASIC2.92□□□□□ -1.94
H3F3AP84243 RPL23AP47-201ENST00000408017 460 ntBASIC2.92□□□□□ -1.94
H3F3AP84243 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
H3F3AP84243 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.92□□□□□ -1.94
H3F3AP84243 RPF2P1-201ENST00000424137 906 ntBASIC2.92□□□□□ -1.94
H3F3AP84243 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.92□□□□□ -1.94
H3F3AP84243 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC2.92□□□□□ -1.94
H3F3AP84243 AC005326.1-201ENST00000429197 123 ntBASIC2.92□□□□□ -1.94
H3F3AP84243 AL392003.1-201ENST00000434394 243 ntBASIC2.92□□□□□ -1.94
H3F3AP84243 RPL21P112-201ENST00000434403 463 ntBASIC2.92□□□□□ -1.94
H3F3AP84243 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.92□□□□□ -1.94
H3F3AP84243 RPL23AP33-201ENST00000442301 452 ntBASIC2.92□□□□□ -1.94
H3F3AP84243 Z99127.3-201ENST00000448158 395 ntBASIC2.92□□□□□ -1.94
H3F3AP84243 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC2.92□□□□□ -1.94
H3F3AP84243 ELOCP23-201ENST00000452014 332 ntBASIC2.92□□□□□ -1.94
H3F3AP84243 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.92□□□□□ -1.94
H3F3AP84243 RPS4XP10-201ENST00000465034 731 ntBASIC2.92□□□□□ -1.94
H3F3AP84243 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC2.92□□□□□ -1.94
H3F3AP84243 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.92□□□□□ -1.94
H3F3AP84243 RPL31P13-201ENST00000484151 370 ntBASIC2.92□□□□□ -1.94
H3F3AP84243 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
H3F3AP84243 HSPD1P15-201ENST00000505573 1122 ntBASIC2.92□□□□□ -1.94
H3F3AP84243 AC110794.1-201ENST00000505816 425 ntBASIC2.92□□□□□ -1.94
H3F3AP84243 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.92□□□□□ -1.94
H3F3AP84243 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC2.92□□□□□ -1.94
H3F3AP84243 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.92□□□□□ -1.94
H3F3AP84243 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.92□□□□□ -1.94
H3F3AP84243 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.92□□□□□ -1.94
H3F3AP84243 HIGD1AP1-201ENST00000550979 275 ntBASIC2.92□□□□□ -1.94
H3F3AP84243 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.92□□□□□ -1.94
H3F3AP84243 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.92□□□□□ -1.94
H3F3AP84243 RN7SL339P-201ENST00000580597 296 ntBASIC2.92□□□□□ -1.94
H3F3AP84243 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.92□□□□□ -1.94
H3F3AP84243 AC069200.1-201ENST00000609511 323 ntBASIC2.92□□□□□ -1.94
H3F3AP84243 AC005156.1-201ENST00000613371 573 ntBASIC2.92□□□□□ -1.94
H3F3AP84243 AC012314.7-201ENST00000619693 93 ntBASIC2.92□□□□□ -1.94
H3F3AP84243 AC092184.1-201ENST00000625042 715 ntBASIC2.92□□□□□ -1.94
H3F3AP84243 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.92□□□□□ -1.94
H3F3AP84243 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.92□□□□□ -1.94
H3F3AP84243 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.92□□□□□ -1.94
H3F3AP84243 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.92□□□□□ -1.94
H3F3AP84243 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.92□□□□□ -1.94
H3F3AP84243 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
H3F3AP84243 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
H3F3AP84243 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.91□□□□□ -1.94
H3F3AP84243 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
H3F3AP84243 RNA5SP295-201ENST00000362655 121 ntBASIC2.91□□□□□ -1.94
H3F3AP84243 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
H3F3AP84243 MIR34B-201ENST00000385076 84 ntBASIC2.91□□□□□ -1.94
H3F3AP84243 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
H3F3AP84243 SNORA48.8-201ENST00000391324 134 ntBASIC2.91□□□□□ -1.94
H3F3AP84243 DNAJC19P6-201ENST00000401853 280 ntBASIC2.91□□□□□ -1.94
H3F3AP84243 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.91□□□□□ -1.94
H3F3AP84243 AL158156.1-201ENST00000422509 473 ntBASIC2.91□□□□□ -1.94
H3F3AP84243 GLRXP1-201ENST00000423261 334 ntBASIC2.91□□□□□ -1.94
H3F3AP84243 FAR1P1-201ENST00000427163 934 ntBASIC2.91□□□□□ -1.94
H3F3AP84243 CST9LP2-201ENST00000437612 320 ntBASIC2.91□□□□□ -1.94
H3F3AP84243 ISCA1P2-201ENST00000438679 421 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms