Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AL353743.1-202ENST00000431724 1695 ntBASIC3.94□□□□□ -1.78
CCNA1P78396 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCNA1P78396 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCNA1P78396 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCNA1P78396 AC116096.1-201ENST00000566804 2314 ntBASIC3.93□□□□□ -1.78
CCNA1P78396 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCNA1P78396 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.93□□□□□ -1.78
CCNA1P78396 SNORA51.2-201ENST00000364595 132 ntBASIC3.93□□□□□ -1.78
CCNA1P78396 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCNA1P78396 U3.26-201ENST00000391236 204 ntBASIC3.93□□□□□ -1.78
CCNA1P78396 RSL24D1P1-201ENST00000404972 493 ntBASIC3.93□□□□□ -1.78
CCNA1P78396 AL589655.1-201ENST00000405398 482 ntBASIC3.93□□□□□ -1.78
CCNA1P78396 HSPE1P8-201ENST00000406997 288 ntBASIC3.93□□□□□ -1.78
CCNA1P78396 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.93□□□□□ -1.78
CCNA1P78396 HMGB1P45-201ENST00000435986 653 ntBASIC3.93□□□□□ -1.78
CCNA1P78396 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.93□□□□□ -1.78
CCNA1P78396 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.93□□□□□ -1.78
CCNA1P78396 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.93□□□□□ -1.78
CCNA1P78396 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.93□□□□□ -1.78
CCNA1P78396 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.93□□□□□ -1.78
CCNA1P78396 snoU13.7-201ENST00000459220 104 ntBASIC3.93□□□□□ -1.78
CCNA1P78396 AP001992.1-205ENST00000462248 379 ntBASIC3.93□□□□□ -1.78
CCNA1P78396 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.93□□□□□ -1.78
CCNA1P78396 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.93□□□□□ -1.78
CCNA1P78396 SNORA31.13-201ENST00000516624 135 ntBASIC3.93□□□□□ -1.78
CCNA1P78396 MIR2114-201ENST00000516645 80 ntBASIC3.93□□□□□ -1.78
CCNA1P78396 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.93□□□□□ -1.78
CCNA1P78396 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.93□□□□□ -1.78
CCNA1P78396 AC018618.2-201ENST00000604770 446 ntBASIC3.93□□□□□ -1.78
CCNA1P78396 AC079610.2-201ENST00000604818 690 ntBASIC3.93□□□□□ -1.78
CCNA1P78396 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.93□□□□□ -1.78
CCNA1P78396 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.93□□□□□ -1.78
CCNA1P78396 AL354976.1-201ENST00000613843 387 ntBASIC3.93□□□□□ -1.78
CCNA1P78396 AC009032.1-201ENST00000617574 431 ntBASIC3.93□□□□□ -1.78
CCNA1P78396 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.93□□□□□ -1.78
CCNA1P78396 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCNA1P78396 AP001486.2-201ENST00000561652 5113 ntBASIC3.93□□□□□ -1.78
CCNA1P78396 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCNA1P78396 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCNA1P78396 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCNA1P78396 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCNA1P78396 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.92□□□□□ -1.78
CCNA1P78396 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCNA1P78396 AL356274.2-201ENST00000624379 3752 ntBASIC3.92□□□□□ -1.78
CCNA1P78396 RAD1P1-201ENST00000231383 813 ntBASIC3.92□□□□□ -1.78
CCNA1P78396 RNA5SP374-201ENST00000362939 125 ntBASIC3.92□□□□□ -1.78
CCNA1P78396 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCNA1P78396 RNU6-1293P-201ENST00000384077 107 ntBASIC3.92□□□□□ -1.78
CCNA1P78396 UBA52P6-201ENST00000399822 382 ntBASIC3.92□□□□□ -1.78
CCNA1P78396 MIR1303-201ENST00000408625 86 ntBASIC3.92□□□□□ -1.78
CCNA1P78396 RNU4-47P-201ENST00000410876 114 ntBASIC3.92□□□□□ -1.78
CCNA1P78396 LINC01347-201ENST00000417964 355 ntBASIC3.92□□□□□ -1.78
CCNA1P78396 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.92□□□□□ -1.78
CCNA1P78396 MTND2P16-201ENST00000419987 799 ntBASIC3.92□□□□□ -1.78
CCNA1P78396 AL159169.1-201ENST00000421119 127 ntBASIC3.92□□□□□ -1.78
CCNA1P78396 AC006989.1-201ENST00000427212 131 ntBASIC3.92□□□□□ -1.78
CCNA1P78396 USP12PY-201ENST00000427677 1064 ntBASIC3.92□□□□□ -1.78
CCNA1P78396 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.92□□□□□ -1.78
CCNA1P78396 AL671855.1-201ENST00000446875 1203 ntBASIC3.92□□□□□ -1.78
CCNA1P78396 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.92□□□□□ -1.78
CCNA1P78396 RPL21P104-201ENST00000464143 478 ntBASIC3.92□□□□□ -1.78
CCNA1P78396 RPL27AP5-201ENST00000469428 449 ntBASIC3.92□□□□□ -1.78
CCNA1P78396 TRBV8-2-201ENST00000475637 270 ntBASIC3.92□□□□□ -1.78
CCNA1P78396 AL049873.1-201ENST00000480540 376 ntBASIC3.92□□□□□ -1.78
CCNA1P78396 NCOR1P1-202ENST00000486162 291 ntBASIC3.92□□□□□ -1.78
CCNA1P78396 RPL23AP73-201ENST00000492507 471 ntBASIC3.92□□□□□ -1.78
CCNA1P78396 OR9N1P-202ENST00000494289 481 ntBASIC3.92□□□□□ -1.78
CCNA1P78396 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCNA1P78396 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.92□□□□□ -1.78
CCNA1P78396 APOOP4-201ENST00000513530 597 ntBASIC3.92□□□□□ -1.78
CCNA1P78396 AC008494.2-201ENST00000514544 370 ntBASIC3.92□□□□□ -1.78
CCNA1P78396 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.92□□□□□ -1.78
CCNA1P78396 AC104115.2-201ENST00000523026 687 ntBASIC3.92□□□□□ -1.78
CCNA1P78396 AC092851.1-201ENST00000535964 478 ntBASIC3.92□□□□□ -1.78
CCNA1P78396 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.92□□□□□ -1.78
CCNA1P78396 AC090312.2-201ENST00000582687 378 ntBASIC3.92□□□□□ -1.78
CCNA1P78396 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.92□□□□□ -1.78
CCNA1P78396 AC125494.3-201ENST00000602759 455 ntBASIC3.92□□□□□ -1.78
CCNA1P78396 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.92□□□□□ -1.78
CCNA1P78396 U73479.1-201ENST00000618062 168 ntBASIC3.92□□□□□ -1.78
CCNA1P78396 RNU6-156P-201ENST00000621869 107 ntBASIC3.92□□□□□ -1.78
CCNA1P78396 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
CCNA1P78396 DDX6P1-205ENST00000441966 1436 ntBASIC3.92□□□□□ -1.78
CCNA1P78396 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCNA1P78396 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
CCNA1P78396 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCNA1P78396 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CCNA1P78396 RNA5SP322-201ENST00000363617 119 ntBASIC3.91□□□□□ -1.78
CCNA1P78396 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.91□□□□□ -1.78
CCNA1P78396 VTA1P1-201ENST00000414044 866 ntBASIC3.91□□□□□ -1.78
CCNA1P78396 AC023128.2-201ENST00000420880 1223 ntBASIC3.91□□□□□ -1.78
CCNA1P78396 AL353678.1-201ENST00000422735 741 ntBASIC3.91□□□□□ -1.78
CCNA1P78396 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCNA1P78396 PPIAP17-201ENST00000438507 471 ntBASIC3.91□□□□□ -1.78
CCNA1P78396 SAGE4P-201ENST00000442271 3381 ntBASIC3.91□□□□□ -1.78
CCNA1P78396 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.91□□□□□ -1.78
CCNA1P78396 Z77249.1-201ENST00000444622 1175 ntBASIC3.91□□□□□ -1.78
CCNA1P78396 RNU7-170P-201ENST00000459303 61 ntBASIC3.91□□□□□ -1.78
CCNA1P78396 AP001486.1-201ENST00000463339 476 ntBASIC3.91□□□□□ -1.78
CCNA1P78396 AL035404.1-201ENST00000497982 568 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms