Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AL157687.1-201ENST00000554853 619 ntBASIC5.14□□□□□ -1.59
GABREP78334 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.14□□□□□ -1.59
GABREP78334 AC060771.1-201ENST00000582031 164 ntBASIC5.14□□□□□ -1.59
GABREP78334 AC011447.4-201ENST00000587562 111 ntBASIC5.14□□□□□ -1.59
GABREP78334 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.14□□□□□ -1.59
GABREP78334 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.14□□□□□ -1.59
GABREP78334 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.14□□□□□ -1.59
GABREP78334 AL391813.2-201ENST00000609113 322 ntBASIC5.14□□□□□ -1.59
GABREP78334 AL049794.2-201ENST00000616301 365 ntBASIC5.14□□□□□ -1.59
GABREP78334 AC139792.3-201ENST00000623525 224 ntBASIC5.14□□□□□ -1.59
GABREP78334 AC079597.1-201ENST00000624306 508 ntBASIC5.14□□□□□ -1.59
GABREP78334 AC000095.2-202ENST00000637415 154 ntBASIC5.14□□□□□ -1.59
GABREP78334 AL596275.2-204ENST00000641628 552 ntBASIC5.14□□□□□ -1.59
GABREP78334 AL596275.2-206ENST00000641957 626 ntBASIC5.14□□□□□ -1.59
GABREP78334 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.14□□□□□ -1.59
GABREP78334 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
GABREP78334 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
GABREP78334 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
GABREP78334 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
GABREP78334 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
GABREP78334 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
GABREP78334 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
GABREP78334 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
GABREP78334 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.14□□□□□ -1.59
GABREP78334 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
GABREP78334 SAGE2P-201ENST00000420011 2126 ntBASIC5.14□□□□□ -1.59
GABREP78334 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.14□□□□□ -1.59
GABREP78334 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
GABREP78334 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
GABREP78334 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.13□□□□□ -1.59
GABREP78334 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
GABREP78334 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.13□□□□□ -1.59
GABREP78334 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.13□□□□□ -1.59
GABREP78334 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
GABREP78334 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GABREP78334 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
GABREP78334 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
GABREP78334 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
GABREP78334 OR5J1P-201ENST00000313544 939 ntBASIC5.13□□□□□ -1.59
GABREP78334 RN7SKP104-201ENST00000362605 328 ntBASIC5.13□□□□□ -1.59
GABREP78334 MIR105-1-201ENST00000385222 81 ntBASIC5.13□□□□□ -1.59
GABREP78334 U3.20-201ENST00000390909 217 ntBASIC5.13□□□□□ -1.59
GABREP78334 MTND4LP20-201ENST00000402379 270 ntBASIC5.13□□□□□ -1.59
GABREP78334 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GABREP78334 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.13□□□□□ -1.59
GABREP78334 OR51AB1P-201ENST00000429046 620 ntBASIC5.13□□□□□ -1.59
GABREP78334 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GABREP78334 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.13□□□□□ -1.59
GABREP78334 AC108734.1-201ENST00000439549 399 ntBASIC5.13□□□□□ -1.59
GABREP78334 GAPDHP25-201ENST00000447061 1001 ntBASIC5.13□□□□□ -1.59
GABREP78334 IGHV5-78-201ENST00000450948 295 ntBASIC5.13□□□□□ -1.59
GABREP78334 RPL12P39-201ENST00000455456 496 ntBASIC5.13□□□□□ -1.59
GABREP78334 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.13□□□□□ -1.59
GABREP78334 Z92846.1-201ENST00000456203 268 ntBASIC5.13□□□□□ -1.59
GABREP78334 AC092324.1-201ENST00000468671 324 ntBASIC5.13□□□□□ -1.59
GABREP78334 AC021382.1-201ENST00000483523 359 ntBASIC5.13□□□□□ -1.59
GABREP78334 RPL23AP41-201ENST00000484754 458 ntBASIC5.13□□□□□ -1.59
GABREP78334 AC005798.1-201ENST00000513715 387 ntBASIC5.13□□□□□ -1.59
GABREP78334 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.13□□□□□ -1.59
GABREP78334 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.13□□□□□ -1.59
GABREP78334 SUB1P2-201ENST00000556401 297 ntBASIC5.13□□□□□ -1.59
GABREP78334 AC079075.1-201ENST00000559543 878 ntBASIC5.13□□□□□ -1.59
GABREP78334 HMGB3P26-201ENST00000560051 582 ntBASIC5.13□□□□□ -1.59
GABREP78334 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.13□□□□□ -1.59
GABREP78334 HNRNPCP4-201ENST00000571636 900 ntBASIC5.13□□□□□ -1.59
GABREP78334 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.13□□□□□ -1.59
GABREP78334 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.13□□□□□ -1.59
GABREP78334 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC5.13□□□□□ -1.59
GABREP78334 AL391646.1-201ENST00000603860 190 ntBASIC5.13□□□□□ -1.59
GABREP78334 AC011451.2-201ENST00000604303 598 ntBASIC5.13□□□□□ -1.59
GABREP78334 uc_338.18-201ENST00000615451 175 ntBASIC5.13□□□□□ -1.59
GABREP78334 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.13□□□□□ -1.59
GABREP78334 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GABREP78334 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
GABREP78334 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
GABREP78334 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
GABREP78334 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
GABREP78334 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
GABREP78334 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
GABREP78334 AL049555.1-201ENST00000562834 1933 ntBASIC5.13□□□□□ -1.59
GABREP78334 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
GABREP78334 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
GABREP78334 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.13□□□□□ -1.59
GABREP78334 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GABREP78334 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.12□□□□□ -1.59
GABREP78334 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
GABREP78334 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
GABREP78334 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.12□□□□□ -1.59
GABREP78334 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
GABREP78334 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
GABREP78334 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
GABREP78334 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
GABREP78334 INTS6P1-201ENST00000504674 2530 ntBASIC5.12□□□□□ -1.59
GABREP78334 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.12□□□□□ -1.59
GABREP78334 AL049693.1-201ENST00000402760 611 ntBASIC5.12□□□□□ -1.59
GABREP78334 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.12□□□□□ -1.59
GABREP78334 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.12□□□□□ -1.59
GABREP78334 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.12□□□□□ -1.59
GABREP78334 HMGN2P27-201ENST00000427352 270 ntBASIC5.12□□□□□ -1.59
GABREP78334 AC006548.1-201ENST00000427470 102 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms