Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.32□□□□□ -1.88
CLDN6P56747 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN6P56747 VTA1P1-201ENST00000414044 866 ntBASIC3.32□□□□□ -1.88
CLDN6P56747 SDCBPP2-201ENST00000424643 885 ntBASIC3.32□□□□□ -1.88
CLDN6P56747 OR51AB1P-201ENST00000429046 620 ntBASIC3.32□□□□□ -1.88
CLDN6P56747 AC009263.1-201ENST00000441193 1239 ntBASIC3.32□□□□□ -1.88
CLDN6P56747 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN6P56747 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN6P56747 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN6P56747 RPL7P38-201ENST00000488396 739 ntBASIC3.32□□□□□ -1.88
CLDN6P56747 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN6P56747 AP001086.1-201ENST00000494882 321 ntBASIC3.32□□□□□ -1.88
CLDN6P56747 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN6P56747 RN7SKP83-201ENST00000516512 178 ntBASIC3.32□□□□□ -1.88
CLDN6P56747 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN6P56747 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.32□□□□□ -1.88
CLDN6P56747 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN6P56747 AP004242.1-201ENST00000533701 349 ntBASIC3.32□□□□□ -1.88
CLDN6P56747 MIR4276-201ENST00000584832 70 ntBASIC3.32□□□□□ -1.88
CLDN6P56747 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.32□□□□□ -1.88
CLDN6P56747 AC011374.2-201ENST00000607135 526 ntBASIC3.32□□□□□ -1.88
CLDN6P56747 AC015802.5-201ENST00000607478 399 ntBASIC3.32□□□□□ -1.88
CLDN6P56747 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN6P56747 AL732618.1-201ENST00000623251 301 ntBASIC3.32□□□□□ -1.88
CLDN6P56747 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN6P56747 MTND4P10-201ENST00000446199 1363 ntBASIC3.32□□□□□ -1.88
CLDN6P56747 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN6P56747 CR381670.1-201ENST00000624291 1693 ntBASIC3.32□□□□□ -1.88
CLDN6P56747 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CLDN6P56747 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN6P56747 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN6P56747 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.31□□□□□ -1.88
CLDN6P56747 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN6P56747 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN6P56747 RPS4XP5-202ENST00000449995 1334 ntBASIC3.31□□□□□ -1.88
CLDN6P56747 SNORA80A-201ENST00000363922 136 ntBASIC3.31□□□□□ -1.88
CLDN6P56747 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN6P56747 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN6P56747 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN6P56747 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.31□□□□□ -1.88
CLDN6P56747 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.31□□□□□ -1.88
CLDN6P56747 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN6P56747 RPS26P40-201ENST00000435209 294 ntBASIC3.31□□□□□ -1.88
CLDN6P56747 SKP1P1-201ENST00000438081 489 ntBASIC3.31□□□□□ -1.88
CLDN6P56747 RPL23AP33-201ENST00000442301 452 ntBASIC3.31□□□□□ -1.88
CLDN6P56747 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN6P56747 AC092685.1-201ENST00000447960 1243 ntBASIC3.31□□□□□ -1.88
CLDN6P56747 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN6P56747 AC097262.1-201ENST00000452559 548 ntBASIC3.31□□□□□ -1.88
CLDN6P56747 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.31□□□□□ -1.88
CLDN6P56747 snoU13.7-201ENST00000459220 104 ntBASIC3.31□□□□□ -1.88
CLDN6P56747 AC104689.1-201ENST00000473356 768 ntBASIC3.31□□□□□ -1.88
CLDN6P56747 RPS3AP14-201ENST00000483907 780 ntBASIC3.31□□□□□ -1.88
CLDN6P56747 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN6P56747 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.31□□□□□ -1.88
CLDN6P56747 AC021146.1-201ENST00000511202 716 ntBASIC3.31□□□□□ -1.88
CLDN6P56747 RPL7L1P13-201ENST00000511702 739 ntBASIC3.31□□□□□ -1.88
CLDN6P56747 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN6P56747 SNORA70.14-201ENST00000516205 110 ntBASIC3.31□□□□□ -1.88
CLDN6P56747 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN6P56747 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN6P56747 OR6C73P-201ENST00000546432 358 ntBASIC3.31□□□□□ -1.88
CLDN6P56747 AC074029.1-201ENST00000552531 1044 ntBASIC3.31□□□□□ -1.88
CLDN6P56747 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.31□□□□□ -1.88
CLDN6P56747 AC067805.1-201ENST00000559344 470 ntBASIC3.31□□□□□ -1.88
CLDN6P56747 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN6P56747 AC107294.1-201ENST00000609524 467 ntBASIC3.31□□□□□ -1.88
CLDN6P56747 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN6P56747 AC127502.3-201ENST00000636170 1206 ntBASIC3.31□□□□□ -1.88
CLDN6P56747 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN6P56747 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN6P56747 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN6P56747 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
CLDN6P56747 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CLDN6P56747 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN6P56747 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN6P56747 AC119744.1-201ENST00000454746 1715 ntBASIC3.3□□□□□ -1.88
CLDN6P56747 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN6P56747 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.3□□□□□ -1.88
CLDN6P56747 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.3□□□□□ -1.88
CLDN6P56747 GABPAP-201ENST00000419271 1356 ntBASIC3.3□□□□□ -1.88
CLDN6P56747 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
CLDN6P56747 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN6P56747 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN6P56747 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
CLDN6P56747 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN6P56747 XKRYP4-201ENST00000414395 483 ntBASIC3.3□□□□□ -1.88
CLDN6P56747 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN6P56747 AC093698.1-201ENST00000423843 571 ntBASIC3.3□□□□□ -1.88
CLDN6P56747 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN6P56747 AC114878.1-201ENST00000441166 358 ntBASIC3.3□□□□□ -1.88
CLDN6P56747 XKRYP5-201ENST00000449659 483 ntBASIC3.3□□□□□ -1.88
CLDN6P56747 ANP32BP2-201ENST00000454525 545 ntBASIC3.3□□□□□ -1.88
CLDN6P56747 AC006445.1-201ENST00000491925 405 ntBASIC3.3□□□□□ -1.88
CLDN6P56747 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN6P56747 AC068305.1-201ENST00000497406 726 ntBASIC3.3□□□□□ -1.88
CLDN6P56747 AC078918.1-201ENST00000498515 228 ntBASIC3.3□□□□□ -1.88
CLDN6P56747 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN6P56747 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN6P56747 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms