Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 DNAJC19P8-201ENST00000452887 259 ntBASIC3.87□□□□□ -1.79
PEX3P56589 RN7SL594P-201ENST00000470590 287 ntBASIC3.87□□□□□ -1.79
PEX3P56589 AC023598.1-201ENST00000472521 361 ntBASIC3.87□□□□□ -1.79
PEX3P56589 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.87□□□□□ -1.79
PEX3P56589 AC008427.1-201ENST00000503102 655 ntBASIC3.87□□□□□ -1.79
PEX3P56589 AC008494.2-201ENST00000514544 370 ntBASIC3.87□□□□□ -1.79
PEX3P56589 PRELID3BP4-201ENST00000515476 571 ntBASIC3.87□□□□□ -1.79
PEX3P56589 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.87□□□□□ -1.79
PEX3P56589 AC008562.1-201ENST00000521763 330 ntBASIC3.87□□□□□ -1.79
PEX3P56589 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.87□□□□□ -1.79
PEX3P56589 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.87□□□□□ -1.79
PEX3P56589 CCNG2P1-201ENST00000549521 1000 ntBASIC3.87□□□□□ -1.79
PEX3P56589 AP000919.1-202ENST00000581139 1264 ntBASIC3.87□□□□□ -1.79
PEX3P56589 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.87□□□□□ -1.79
PEX3P56589 NTAN1P1-201ENST00000603150 646 ntBASIC3.87□□□□□ -1.79
PEX3P56589 AL158050.2-201ENST00000605336 568 ntBASIC3.87□□□□□ -1.79
PEX3P56589 MIR92B-201ENST00000607575 96 ntBASIC3.87□□□□□ -1.79
PEX3P56589 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.87□□□□□ -1.79
PEX3P56589 AP003072.4-201ENST00000624580 310 ntBASIC3.87□□□□□ -1.79
PEX3P56589 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.87□□□□□ -1.79
PEX3P56589 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
PEX3P56589 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PEX3P56589 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PEX3P56589 MTCO1P6-201ENST00000481192 1384 ntBASIC3.87□□□□□ -1.79
PEX3P56589 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PEX3P56589 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.86□□□□□ -1.79
PEX3P56589 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PEX3P56589 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PEX3P56589 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PEX3P56589 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PEX3P56589 RNU5E-10P-201ENST00000363506 118 ntBASIC3.86□□□□□ -1.79
PEX3P56589 RNU6-1339P-201ENST00000363574 91 ntBASIC3.86□□□□□ -1.79
PEX3P56589 U6.112-201ENST00000384129 70 ntBASIC3.86□□□□□ -1.79
PEX3P56589 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.86□□□□□ -1.79
PEX3P56589 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.86□□□□□ -1.79
PEX3P56589 AC092638.1-201ENST00000411966 1275 ntBASIC3.86□□□□□ -1.79
PEX3P56589 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.86□□□□□ -1.79
PEX3P56589 AC093578.1-201ENST00000415219 368 ntBASIC3.86□□□□□ -1.79
PEX3P56589 AC027644.1-201ENST00000419595 298 ntBASIC3.86□□□□□ -1.79
PEX3P56589 BX842559.1-201ENST00000419615 532 ntBASIC3.86□□□□□ -1.79
PEX3P56589 USP9YP21-201ENST00000420603 432 ntBASIC3.86□□□□□ -1.79
PEX3P56589 AL159169.1-201ENST00000421119 127 ntBASIC3.86□□□□□ -1.79
PEX3P56589 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.86□□□□□ -1.79
PEX3P56589 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.86□□□□□ -1.79
PEX3P56589 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.86□□□□□ -1.79
PEX3P56589 AC092170.1-201ENST00000440211 356 ntBASIC3.86□□□□□ -1.79
PEX3P56589 RPS7P5-201ENST00000441482 581 ntBASIC3.86□□□□□ -1.79
PEX3P56589 TPTE2P6-202ENST00000445572 1007 ntBASIC3.86□□□□□ -1.79
PEX3P56589 PPIAP3-201ENST00000450588 505 ntBASIC3.86□□□□□ -1.79
PEX3P56589 RBMY2UP-201ENST00000453474 324 ntBASIC3.86□□□□□ -1.79
PEX3P56589 MTCO3P16-201ENST00000454456 754 ntBASIC3.86□□□□□ -1.79
PEX3P56589 RNU7-140P-201ENST00000459546 60 ntBASIC3.86□□□□□ -1.79
PEX3P56589 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.86□□□□□ -1.79
PEX3P56589 AP000926.1-201ENST00000479573 241 ntBASIC3.86□□□□□ -1.79
PEX3P56589 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.86□□□□□ -1.79
PEX3P56589 NDUFB4P9-201ENST00000511646 388 ntBASIC3.86□□□□□ -1.79
PEX3P56589 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.86□□□□□ -1.79
PEX3P56589 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.86□□□□□ -1.79
PEX3P56589 AP000926.4-201ENST00000527351 454 ntBASIC3.86□□□□□ -1.79
PEX3P56589 AC118942.1-201ENST00000529674 1035 ntBASIC3.86□□□□□ -1.79
PEX3P56589 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PEX3P56589 AC007458.1-201ENST00000542812 373 ntBASIC3.86□□□□□ -1.79
PEX3P56589 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PEX3P56589 BNIP3P4-201ENST00000604946 565 ntBASIC3.86□□□□□ -1.79
PEX3P56589 AL034351.1-201ENST00000605288 668 ntBASIC3.86□□□□□ -1.79
PEX3P56589 AC013468.1-201ENST00000608680 598 ntBASIC3.86□□□□□ -1.79
PEX3P56589 AC093673.2-201ENST00000609674 331 ntBASIC3.86□□□□□ -1.79
PEX3P56589 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PEX3P56589 AC022079.2-201ENST00000619739 566 ntBASIC3.86□□□□□ -1.79
PEX3P56589 AC092608.3-201ENST00000625017 386 ntBASIC3.86□□□□□ -1.79
PEX3P56589 AL121594.5-201ENST00000631724 573 ntBASIC3.86□□□□□ -1.79
PEX3P56589 AC244205.2-202ENST00000635781 342 ntBASIC3.86□□□□□ -1.79
PEX3P56589 AL445984.1-201ENST00000637834 659 ntBASIC3.86□□□□□ -1.79
PEX3P56589 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.86□□□□□ -1.79
PEX3P56589 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.86□□□□□ -1.79
PEX3P56589 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.86□□□□□ -1.79
PEX3P56589 AC068647.1-201ENST00000489539 2265 ntBASIC3.86□□□□□ -1.79
PEX3P56589 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
PEX3P56589 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PEX3P56589 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PEX3P56589 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PEX3P56589 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
PEX3P56589 AL136964.1-201ENST00000622038 2990 ntBASIC3.85□□□□□ -1.79
PEX3P56589 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PEX3P56589 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.85□□□□□ -1.79
PEX3P56589 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PEX3P56589 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
PEX3P56589 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PEX3P56589 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PEX3P56589 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
PEX3P56589 RNU4-35P-201ENST00000362588 141 ntBASIC3.85□□□□□ -1.79
PEX3P56589 SNORD6-201ENST00000365444 73 ntBASIC3.85□□□□□ -1.79
PEX3P56589 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.85□□□□□ -1.79
PEX3P56589 DNAJC19P6-201ENST00000401853 280 ntBASIC3.85□□□□□ -1.79
PEX3P56589 RNU2-65P-201ENST00000410162 185 ntBASIC3.85□□□□□ -1.79
PEX3P56589 AC009237.5-201ENST00000414271 501 ntBASIC3.85□□□□□ -1.79
PEX3P56589 AL365396.1-201ENST00000430854 671 ntBASIC3.85□□□□□ -1.79
PEX3P56589 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.85□□□□□ -1.79
PEX3P56589 AL929288.2-201ENST00000446368 407 ntBASIC3.85□□□□□ -1.79
PEX3P56589 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms