Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AL365503.1-201ENST00000605247 905 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 AC109347.2-201ENST00000610220 349 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 AC131902.3-201ENST00000611767 581 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.48□□□□□ -1.69
SUMO3P55854 AC087241.4-201ENST00000612441 480 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.48□□□□□ -1.69
SUMO3P55854 AC008121.2-201ENST00000614647 523 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 U73479.1-201ENST00000618062 168 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 AC015914.2-201ENST00000618167 288 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 AC099842.1-201ENST00000619919 596 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 AC040168.1-201ENST00000623594 991 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 AP001784.1-201ENST00000624107 428 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.48□□□□□ -1.69
SUMO3P55854 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.48□□□□□ -1.69
SUMO3P55854 BMS1P21-201ENST00000634565 365 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SUMO3P55854 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SUMO3P55854 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SUMO3P55854 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SUMO3P55854 INTS6P1-201ENST00000504674 2530 ntBASIC4.47□□□□□ -1.69
SUMO3P55854 AC099654.2-201ENST00000433031 1980 ntBASIC4.47□□□□□ -1.69
SUMO3P55854 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SUMO3P55854 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.47□□□□□ -1.69
SUMO3P55854 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.47□□□□□ -1.69
SUMO3P55854 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SUMO3P55854 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.47□□□□□ -1.69
SUMO3P55854 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SUMO3P55854 RN7SKP95-201ENST00000362860 303 ntBASIC4.47□□□□□ -1.69
SUMO3P55854 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SUMO3P55854 RNU6-297P-201ENST00000384636 107 ntBASIC4.47□□□□□ -1.69
SUMO3P55854 AL645927.1-201ENST00000396783 406 ntBASIC4.47□□□□□ -1.69
SUMO3P55854 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SUMO3P55854 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.47□□□□□ -1.69
SUMO3P55854 Y_RNA.599-201ENST00000410489 109 ntBASIC4.47□□□□□ -1.69
SUMO3P55854 RNU6-248P-201ENST00000410720 107 ntBASIC4.47□□□□□ -1.69
SUMO3P55854 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.47□□□□□ -1.69
SUMO3P55854 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.47□□□□□ -1.69
SUMO3P55854 CHEK2P3-201ENST00000416118 248 ntBASIC4.47□□□□□ -1.69
SUMO3P55854 OR2AH1P-201ENST00000425717 928 ntBASIC4.47□□□□□ -1.69
SUMO3P55854 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.47□□□□□ -1.69
SUMO3P55854 OR2B7P-201ENST00000429302 934 ntBASIC4.47□□□□□ -1.69
SUMO3P55854 RBMY2QP-201ENST00000429799 1147 ntBASIC4.47□□□□□ -1.69
SUMO3P55854 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.47□□□□□ -1.69
SUMO3P55854 AC093414.1-201ENST00000434712 514 ntBASIC4.47□□□□□ -1.69
SUMO3P55854 RPL22P17-201ENST00000438729 315 ntBASIC4.47□□□□□ -1.69
SUMO3P55854 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.47□□□□□ -1.69
SUMO3P55854 AC108734.1-201ENST00000439549 399 ntBASIC4.47□□□□□ -1.69
SUMO3P55854 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SUMO3P55854 RPL7P24-201ENST00000493052 752 ntBASIC4.47□□□□□ -1.69
SUMO3P55854 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SUMO3P55854 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.47□□□□□ -1.69
SUMO3P55854 PTGES3P3-201ENST00000511479 482 ntBASIC4.47□□□□□ -1.69
SUMO3P55854 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.47□□□□□ -1.69
SUMO3P55854 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.47□□□□□ -1.69
SUMO3P55854 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.47□□□□□ -1.69
SUMO3P55854 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SUMO3P55854 AP006245.2-201ENST00000522004 300 ntBASIC4.47□□□□□ -1.69
SUMO3P55854 OR5M7P-201ENST00000526140 972 ntBASIC4.47□□□□□ -1.69
SUMO3P55854 AP003392.2-201ENST00000527269 208 ntBASIC4.47□□□□□ -1.69
SUMO3P55854 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.47□□□□□ -1.69
SUMO3P55854 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.47□□□□□ -1.69
SUMO3P55854 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.47□□□□□ -1.69
SUMO3P55854 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.47□□□□□ -1.69
SUMO3P55854 SETP2-201ENST00000553886 926 ntBASIC4.47□□□□□ -1.69
SUMO3P55854 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.47□□□□□ -1.69
SUMO3P55854 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.47□□□□□ -1.69
SUMO3P55854 ZNF519P3-201ENST00000557158 1032 ntBASIC4.47□□□□□ -1.69
SUMO3P55854 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.47□□□□□ -1.69
SUMO3P55854 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.47□□□□□ -1.69
SUMO3P55854 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.47□□□□□ -1.69
SUMO3P55854 HMGB2P1-201ENST00000591146 634 ntBASIC4.47□□□□□ -1.69
SUMO3P55854 RNA5SP108-201ENST00000605921 117 ntBASIC4.47□□□□□ -1.69
SUMO3P55854 AC010424.2-201ENST00000607594 443 ntBASIC4.47□□□□□ -1.69
SUMO3P55854 AL589743.7-201ENST00000612637 233 ntBASIC4.47□□□□□ -1.69
SUMO3P55854 AP001506.1-201ENST00000615444 211 ntBASIC4.47□□□□□ -1.69
SUMO3P55854 MIR7155-201ENST00000615925 56 ntBASIC4.47□□□□□ -1.69
SUMO3P55854 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.47□□□□□ -1.69
SUMO3P55854 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.47□□□□□ -1.69
SUMO3P55854 AC027287.1-201ENST00000553115 1453 ntBASIC4.47□□□□□ -1.69
SUMO3P55854 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SUMO3P55854 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
SUMO3P55854 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SUMO3P55854 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SUMO3P55854 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SUMO3P55854 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SUMO3P55854 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
SUMO3P55854 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
SUMO3P55854 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
SUMO3P55854 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SUMO3P55854 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
SUMO3P55854 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SUMO3P55854 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.46□□□□□ -1.69
SUMO3P55854 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
SUMO3P55854 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SUMO3P55854 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.46□□□□□ -1.7
SUMO3P55854 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SUMO3P55854 FRG1BP-201ENST00000278882 761 ntBASIC4.46□□□□□ -1.7
SUMO3P55854 RNU6-97P-201ENST00000363387 104 ntBASIC4.46□□□□□ -1.7
SUMO3P55854 AC136624.1-201ENST00000400791 413 ntBASIC4.46□□□□□ -1.7
SUMO3P55854 RPS20P2-201ENST00000402520 389 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms