Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC107081.3-201ENST00000612715 2034 ntBASIC3.42□□□□□ -1.86
PKNOX1P55347 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PKNOX1P55347 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PKNOX1P55347 AC091152.2-201ENST00000591628 2569 ntBASIC3.42□□□□□ -1.86
PKNOX1P55347 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
PKNOX1P55347 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
PKNOX1P55347 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PKNOX1P55347 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PKNOX1P55347 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
PKNOX1P55347 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
PKNOX1P55347 MTCO1P6-201ENST00000481192 1384 ntBASIC3.41□□□□□ -1.86
PKNOX1P55347 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PKNOX1P55347 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
PKNOX1P55347 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
PKNOX1P55347 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
PKNOX1P55347 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.41□□□□□ -1.86
PKNOX1P55347 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
PKNOX1P55347 RNU6-77P-201ENST00000410554 91 ntBASIC3.41□□□□□ -1.86
PKNOX1P55347 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.41□□□□□ -1.86
PKNOX1P55347 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.41□□□□□ -1.86
PKNOX1P55347 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.41□□□□□ -1.86
PKNOX1P55347 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PKNOX1P55347 PAICSP7-201ENST00000419829 962 ntBASIC3.41□□□□□ -1.86
PKNOX1P55347 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.41□□□□□ -1.86
PKNOX1P55347 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.41□□□□□ -1.86
PKNOX1P55347 AL513175.1-201ENST00000431492 780 ntBASIC3.41□□□□□ -1.86
PKNOX1P55347 RPS29P7-201ENST00000439662 171 ntBASIC3.41□□□□□ -1.86
PKNOX1P55347 AL158053.1-201ENST00000441503 453 ntBASIC3.41□□□□□ -1.86
PKNOX1P55347 HSFY3P-201ENST00000444242 1191 ntBASIC3.41□□□□□ -1.86
PKNOX1P55347 MOB1AP2-201ENST00000446060 614 ntBASIC3.41□□□□□ -1.86
PKNOX1P55347 AC005002.1-201ENST00000447458 540 ntBASIC3.41□□□□□ -1.86
PKNOX1P55347 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.41□□□□□ -1.86
PKNOX1P55347 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.41□□□□□ -1.86
PKNOX1P55347 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.41□□□□□ -1.86
PKNOX1P55347 BX276092.4-201ENST00000452056 248 ntBASIC3.41□□□□□ -1.86
PKNOX1P55347 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.41□□□□□ -1.86
PKNOX1P55347 RPL23AP67-201ENST00000465341 474 ntBASIC3.41□□□□□ -1.86
PKNOX1P55347 RPS4XP6-201ENST00000477670 797 ntBASIC3.41□□□□□ -1.86
PKNOX1P55347 AC078918.1-201ENST00000498515 228 ntBASIC3.41□□□□□ -1.86
PKNOX1P55347 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.41□□□□□ -1.86
PKNOX1P55347 AC093755.1-201ENST00000512950 1023 ntBASIC3.41□□□□□ -1.86
PKNOX1P55347 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.41□□□□□ -1.86
PKNOX1P55347 RNU6-202P-201ENST00000515998 96 ntBASIC3.41□□□□□ -1.86
PKNOX1P55347 RNU6-334P-201ENST00000517072 102 ntBASIC3.41□□□□□ -1.86
PKNOX1P55347 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.41□□□□□ -1.86
PKNOX1P55347 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PKNOX1P55347 IGJP1-201ENST00000522682 475 ntBASIC3.41□□□□□ -1.86
PKNOX1P55347 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.41□□□□□ -1.86
PKNOX1P55347 ZNF192P1-203ENST00000565888 810 ntBASIC3.41□□□□□ -1.86
PKNOX1P55347 AC124283.4-201ENST00000581815 456 ntBASIC3.41□□□□□ -1.86
PKNOX1P55347 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.41□□□□□ -1.86
PKNOX1P55347 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.41□□□□□ -1.86
PKNOX1P55347 MIR6748-201ENST00000610433 71 ntBASIC3.41□□□□□ -1.86
PKNOX1P55347 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.41□□□□□ -1.86
PKNOX1P55347 AC112200.1-201ENST00000625015 234 ntBASIC3.41□□□□□ -1.86
PKNOX1P55347 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.41□□□□□ -1.86
PKNOX1P55347 MIR7153-201ENST00000637758 57 ntBASIC3.41□□□□□ -1.86
PKNOX1P55347 AC004972.1-201ENST00000623934 2209 ntBASIC3.41□□□□□ -1.86
PKNOX1P55347 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PKNOX1P55347 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.41□□□□□ -1.86
PKNOX1P55347 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PKNOX1P55347 RNU1-75P-201ENST00000347264 129 ntBASIC3.4□□□□□ -1.87
PKNOX1P55347 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
PKNOX1P55347 AC007066.1-201ENST00000392902 381 ntBASIC3.4□□□□□ -1.87
PKNOX1P55347 RPL22P22-201ENST00000395439 379 ntBASIC3.4□□□□□ -1.87
PKNOX1P55347 RNU6-272P-201ENST00000411028 104 ntBASIC3.4□□□□□ -1.87
PKNOX1P55347 ATP5A1P2-201ENST00000412323 255 ntBASIC3.4□□□□□ -1.87
PKNOX1P55347 AL513174.1-201ENST00000423182 629 ntBASIC3.4□□□□□ -1.87
PKNOX1P55347 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PKNOX1P55347 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.4□□□□□ -1.87
PKNOX1P55347 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.4□□□□□ -1.87
PKNOX1P55347 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.4□□□□□ -1.87
PKNOX1P55347 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.4□□□□□ -1.87
PKNOX1P55347 RPL6P5-201ENST00000445678 828 ntBASIC3.4□□□□□ -1.87
PKNOX1P55347 GXYLT1P1-201ENST00000446657 490 ntBASIC3.4□□□□□ -1.87
PKNOX1P55347 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.4□□□□□ -1.87
PKNOX1P55347 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.4□□□□□ -1.87
PKNOX1P55347 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.4□□□□□ -1.87
PKNOX1P55347 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.4□□□□□ -1.87
PKNOX1P55347 AC008379.1-201ENST00000463655 464 ntBASIC3.4□□□□□ -1.87
PKNOX1P55347 AC021205.2-201ENST00000480069 347 ntBASIC3.4□□□□□ -1.87
PKNOX1P55347 AC021146.5-201ENST00000503544 545 ntBASIC3.4□□□□□ -1.87
PKNOX1P55347 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.4□□□□□ -1.87
PKNOX1P55347 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PKNOX1P55347 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PKNOX1P55347 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.4□□□□□ -1.87
PKNOX1P55347 RNU6-416P-201ENST00000516265 103 ntBASIC3.4□□□□□ -1.87
PKNOX1P55347 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.4□□□□□ -1.87
PKNOX1P55347 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.4□□□□□ -1.87
PKNOX1P55347 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.4□□□□□ -1.87
PKNOX1P55347 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.4□□□□□ -1.87
PKNOX1P55347 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.4□□□□□ -1.87
PKNOX1P55347 OR6C73P-201ENST00000546432 358 ntBASIC3.4□□□□□ -1.87
PKNOX1P55347 AC004217.3-201ENST00000551552 878 ntBASIC3.4□□□□□ -1.87
PKNOX1P55347 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.4□□□□□ -1.87
PKNOX1P55347 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.4□□□□□ -1.87
PKNOX1P55347 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.4□□□□□ -1.87
PKNOX1P55347 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.4□□□□□ -1.87
PKNOX1P55347 AC107982.3-201ENST00000584957 985 ntBASIC3.4□□□□□ -1.87
PKNOX1P55347 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms