Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RPL23AP43-201ENST00000446445 471 ntBASIC4.09□□□□□ -1.75
CDH12P55289 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDH12P55289 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.09□□□□□ -1.75
CDH12P55289 NDUFA12P1-201ENST00000455914 406 ntBASIC4.09□□□□□ -1.75
CDH12P55289 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDH12P55289 RPS27AP17-201ENST00000463344 455 ntBASIC4.09□□□□□ -1.75
CDH12P55289 AC097493.1-201ENST00000463958 372 ntBASIC4.09□□□□□ -1.75
CDH12P55289 RPL12P20-201ENST00000475538 479 ntBASIC4.09□□□□□ -1.75
CDH12P55289 IGLV2-34-201ENST00000490007 283 ntBASIC4.09□□□□□ -1.75
CDH12P55289 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.09□□□□□ -1.75
CDH12P55289 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH12P55289 NDUFA5P12-201ENST00000503796 343 ntBASIC4.09□□□□□ -1.75
CDH12P55289 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.09□□□□□ -1.75
CDH12P55289 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH12P55289 MTND4LP31-201ENST00000514859 294 ntBASIC4.09□□□□□ -1.75
CDH12P55289 RNA5SP497-201ENST00000516081 97 ntBASIC4.09□□□□□ -1.75
CDH12P55289 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
CDH12P55289 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH12P55289 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CDH12P55289 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH12P55289 AC069240.1-201ENST00000548774 375 ntBASIC4.09□□□□□ -1.75
CDH12P55289 DYNLL1P4-201ENST00000549314 266 ntBASIC4.09□□□□□ -1.75
CDH12P55289 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH12P55289 AGGF1P4-201ENST00000568249 801 ntBASIC4.09□□□□□ -1.75
CDH12P55289 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH12P55289 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH12P55289 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.09□□□□□ -1.75
CDH12P55289 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.09□□□□□ -1.75
CDH12P55289 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDH12P55289 AC013244.1-201ENST00000604279 193 ntBASIC4.09□□□□□ -1.75
CDH12P55289 AC128687.1-201ENST00000605304 619 ntBASIC4.09□□□□□ -1.75
CDH12P55289 AC107214.2-201ENST00000608204 634 ntBASIC4.09□□□□□ -1.75
CDH12P55289 AP000254.1-201ENST00000609934 520 ntBASIC4.09□□□□□ -1.75
CDH12P55289 LINC00561-201ENST00000565815 2738 ntBASIC4.09□□□□□ -1.75
CDH12P55289 MTND4P5-201ENST00000435821 1374 ntBASIC4.09□□□□□ -1.75
CDH12P55289 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDH12P55289 OR4G11P-202ENST00000642116 1414 ntBASIC4.09□□□□□ -1.75
CDH12P55289 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDH12P55289 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDH12P55289 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDH12P55289 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
CDH12P55289 PABPC1P9-201ENST00000426076 1612 ntBASIC4.09□□□□□ -1.76
CDH12P55289 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.09□□□□□ -1.76
CDH12P55289 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CDH12P55289 PHKBP1-201ENST00000450951 1951 ntBASIC4.09□□□□□ -1.76
CDH12P55289 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
CDH12P55289 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CDH12P55289 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.08□□□□□ -1.76
CDH12P55289 AL592182.3-201ENST00000642132 3304 ntBASIC4.08□□□□□ -1.76
CDH12P55289 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH12P55289 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CDH12P55289 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDH12P55289 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CDH12P55289 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDH12P55289 OR5H15-201ENST00000383696 930 ntBASIC4.08□□□□□ -1.76
CDH12P55289 RNA5SP87-201ENST00000384155 118 ntBASIC4.08□□□□□ -1.76
CDH12P55289 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CDH12P55289 AL160275.2-201ENST00000412010 394 ntBASIC4.08□□□□□ -1.76
CDH12P55289 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.08□□□□□ -1.76
CDH12P55289 PGBD4P8-201ENST00000412993 562 ntBASIC4.08□□□□□ -1.76
CDH12P55289 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.08□□□□□ -1.76
CDH12P55289 AL031779.1-201ENST00000415663 330 ntBASIC4.08□□□□□ -1.76
CDH12P55289 RPS3AP9-201ENST00000417027 792 ntBASIC4.08□□□□□ -1.76
CDH12P55289 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDH12P55289 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH12P55289 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH12P55289 AL049745.1-201ENST00000433953 286 ntBASIC4.08□□□□□ -1.76
CDH12P55289 KCTD10P1-201ENST00000434203 625 ntBASIC4.08□□□□□ -1.76
CDH12P55289 UBE2V1P3-201ENST00000439651 417 ntBASIC4.08□□□□□ -1.76
CDH12P55289 RPL12P3-201ENST00000440080 396 ntBASIC4.08□□□□□ -1.76
CDH12P55289 RPS26P56-201ENST00000444468 240 ntBASIC4.08□□□□□ -1.76
CDH12P55289 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH12P55289 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH12P55289 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.08□□□□□ -1.76
CDH12P55289 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.08□□□□□ -1.76
CDH12P55289 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH12P55289 RNU6-956P-201ENST00000458868 103 ntBASIC4.08□□□□□ -1.76
CDH12P55289 snoU13.7-201ENST00000459220 104 ntBASIC4.08□□□□□ -1.76
CDH12P55289 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.08□□□□□ -1.76
CDH12P55289 AC010469.1-201ENST00000463864 576 ntBASIC4.08□□□□□ -1.76
CDH12P55289 AC087879.1-201ENST00000474343 374 ntBASIC4.08□□□□□ -1.76
CDH12P55289 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH12P55289 AC116337.2-201ENST00000477662 156 ntBASIC4.08□□□□□ -1.76
CDH12P55289 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH12P55289 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
CDH12P55289 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH12P55289 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH12P55289 RNU6-150P-201ENST00000516237 95 ntBASIC4.08□□□□□ -1.76
CDH12P55289 MYL12AP1-201ENST00000518490 515 ntBASIC4.08□□□□□ -1.76
CDH12P55289 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH12P55289 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH12P55289 PHBP17-201ENST00000528576 541 ntBASIC4.08□□□□□ -1.76
CDH12P55289 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.08□□□□□ -1.76
CDH12P55289 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH12P55289 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.08□□□□□ -1.76
CDH12P55289 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH12P55289 MIR4504-201ENST00000577413 92 ntBASIC4.08□□□□□ -1.76
CDH12P55289 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH12P55289 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH12P55289 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms