Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.33□□□□□ -1.72
NR1H2P55055 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NR1H2P55055 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
NR1H2P55055 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NR1H2P55055 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NR1H2P55055 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NR1H2P55055 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NR1H2P55055 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NR1H2P55055 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.33□□□□□ -1.72
NR1H2P55055 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.32□□□□□ -1.72
NR1H2P55055 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NR1H2P55055 SGO1P2-201ENST00000429458 1589 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.32□□□□□ -1.72
NR1H2P55055 AC027287.1-201ENST00000553115 1453 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.32□□□□□ -1.72
NR1H2P55055 DHX40P1-201ENST00000588725 1412 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 DDX43P2-201ENST00000604753 1354 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 ZNF542P-204ENST00000482727 1305 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 RNU1-15P-201ENST00000353977 144 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
NR1H2P55055 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.32□□□□□ -1.72
NR1H2P55055 SNORD116-8-201ENST00000384365 95 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 SNORA11-201ENST00000408789 128 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 RNA5SP113-201ENST00000410486 84 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 USP9YP33-201ENST00000412220 421 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 TPT1P2-201ENST00000413105 503 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 AF186996.5-201ENST00000418098 904 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.32□□□□□ -1.72
NR1H2P55055 AL391219.1-201ENST00000422570 483 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 GLRXP1-201ENST00000423261 334 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 AL732292.1-201ENST00000426692 226 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.32□□□□□ -1.72
NR1H2P55055 RPS25P9-201ENST00000435591 252 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 USP9YP35-201ENST00000435696 412 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 ELOCP8-201ENST00000439309 332 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 ELOCP15-201ENST00000442090 332 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.32□□□□□ -1.72
NR1H2P55055 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.32□□□□□ -1.72
NR1H2P55055 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.32□□□□□ -1.72
NR1H2P55055 HMGN2P21-201ENST00000447764 270 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 RSL24D1P3-201ENST00000449255 495 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 AC010733.1-201ENST00000451515 401 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.32□□□□□ -1.72
NR1H2P55055 AL109741.2-201ENST00000455561 343 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.32□□□□□ -1.72
NR1H2P55055 AC078817.1-201ENST00000492623 435 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 MTCYBP17-201ENST00000503579 789 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.32□□□□□ -1.72
NR1H2P55055 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.32□□□□□ -1.72
NR1H2P55055 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.32□□□□□ -1.72
NR1H2P55055 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.32□□□□□ -1.72
NR1H2P55055 RNA5SP216-201ENST00000516111 123 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.32□□□□□ -1.72
NR1H2P55055 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.32□□□□□ -1.72
NR1H2P55055 AP006289.1-201ENST00000538089 277 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 GCSHP4-201ENST00000538792 439 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.32□□□□□ -1.72
NR1H2P55055 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.32□□□□□ -1.72
NR1H2P55055 AC008015.1-201ENST00000555505 465 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 AC053481.3-201ENST00000577881 843 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.32□□□□□ -1.72
NR1H2P55055 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.32□□□□□ -1.72
NR1H2P55055 AC091178.1-203ENST00000584586 279 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.32□□□□□ -1.72
NR1H2P55055 AC112220.3-201ENST00000605502 502 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.32□□□□□ -1.72
NR1H2P55055 AC233309.1-201ENST00000619522 751 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.32□□□□□ -1.72
NR1H2P55055 CR381572.2-201ENST00000624852 397 ntBASIC4.32□□□□□ -1.72
NR1H2P55055 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.32□□□□□ -1.72
NR1H2P55055 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
NR1H2P55055 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
NR1H2P55055 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NR1H2P55055 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NR1H2P55055 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NR1H2P55055 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.31□□□□□ -1.72
NR1H2P55055 AC012321.1-201ENST00000561622 1588 ntBASIC4.31□□□□□ -1.72
NR1H2P55055 MAPK10-253ENST00000641010 4072 ntBASIC4.31□□□□□ -1.72
NR1H2P55055 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NR1H2P55055 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NR1H2P55055 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.31□□□□□ -1.72
NR1H2P55055 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.31□□□□□ -1.72
NR1H2P55055 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
NR1H2P55055 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NR1H2P55055 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.31□□□□□ -1.72
NR1H2P55055 XIAPP3-201ENST00000312918 795 ntBASIC4.31□□□□□ -1.72
NR1H2P55055 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NR1H2P55055 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NR1H2P55055 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
NR1H2P55055 SNORD116-2-201ENST00000384274 95 ntBASIC4.31□□□□□ -1.72
NR1H2P55055 SNORD116-6-201ENST00000384711 96 ntBASIC4.31□□□□□ -1.72
NR1H2P55055 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.31□□□□□ -1.72
NR1H2P55055 MIR298-201ENST00000401212 88 ntBASIC4.31□□□□□ -1.72
NR1H2P55055 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.31□□□□□ -1.72
NR1H2P55055 MTCO2P5-201ENST00000422621 426 ntBASIC4.31□□□□□ -1.72
NR1H2P55055 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.31□□□□□ -1.72
NR1H2P55055 MRPS18BP2-201ENST00000434310 759 ntBASIC4.31□□□□□ -1.72
NR1H2P55055 YWHAZP7-201ENST00000436906 631 ntBASIC4.31□□□□□ -1.72
NR1H2P55055 AL354941.1-201ENST00000438600 464 ntBASIC4.31□□□□□ -1.72
NR1H2P55055 MTCYBP34-201ENST00000439552 670 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms