Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
HMGCS2P54868 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.89□□□□□ -1.79
HMGCS2P54868 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
HMGCS2P54868 MTND4P26-201ENST00000415971 1359 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HMGCS2P54868 AC068647.1-201ENST00000489539 2265 ntBASIC3.88□□□□□ -1.79
HMGCS2P54868 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HMGCS2P54868 AL356489.2-201ENST00000566968 3528 ntBASIC3.88□□□□□ -1.79
HMGCS2P54868 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.88□□□□□ -1.79
HMGCS2P54868 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
HMGCS2P54868 RNU6-481P-201ENST00000384194 107 ntBASIC3.88□□□□□ -1.79
HMGCS2P54868 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HMGCS2P54868 RPL22P22-201ENST00000395439 379 ntBASIC3.88□□□□□ -1.79
HMGCS2P54868 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.88□□□□□ -1.79
HMGCS2P54868 RNU4-47P-201ENST00000410876 114 ntBASIC3.88□□□□□ -1.79
HMGCS2P54868 BOLA3P4-201ENST00000418151 400 ntBASIC3.88□□□□□ -1.79
HMGCS2P54868 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.88□□□□□ -1.79
HMGCS2P54868 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.88□□□□□ -1.79
HMGCS2P54868 GXYLT1P1-201ENST00000446657 490 ntBASIC3.88□□□□□ -1.79
HMGCS2P54868 RSL24D1P3-201ENST00000449255 495 ntBASIC3.88□□□□□ -1.79
HMGCS2P54868 AC010469.1-201ENST00000463864 576 ntBASIC3.88□□□□□ -1.79
HMGCS2P54868 RPS3AP14-201ENST00000483907 780 ntBASIC3.88□□□□□ -1.79
HMGCS2P54868 AC023050.1-201ENST00000498198 304 ntBASIC3.88□□□□□ -1.79
HMGCS2P54868 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.88□□□□□ -1.79
HMGCS2P54868 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.88□□□□□ -1.79
HMGCS2P54868 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.88□□□□□ -1.79
HMGCS2P54868 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.88□□□□□ -1.79
HMGCS2P54868 AP003355.1-201ENST00000518956 587 ntBASIC3.88□□□□□ -1.79
HMGCS2P54868 AP000916.1-201ENST00000533869 835 ntBASIC3.88□□□□□ -1.79
HMGCS2P54868 AC004024.1-201ENST00000549244 247 ntBASIC3.88□□□□□ -1.79
HMGCS2P54868 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.88□□□□□ -1.79
HMGCS2P54868 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.88□□□□□ -1.79
HMGCS2P54868 AL121594.4-201ENST00000556211 1196 ntBASIC3.88□□□□□ -1.79
HMGCS2P54868 AC104072.1-201ENST00000568817 668 ntBASIC3.88□□□□□ -1.79
HMGCS2P54868 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.88□□□□□ -1.79
HMGCS2P54868 BNIP3P27-201ENST00000599991 412 ntBASIC3.88□□□□□ -1.79
HMGCS2P54868 AC110792.4-201ENST00000609843 298 ntBASIC3.88□□□□□ -1.79
HMGCS2P54868 AC055764.2-201ENST00000610089 670 ntBASIC3.88□□□□□ -1.79
HMGCS2P54868 MIR7973-1-201ENST00000614683 76 ntBASIC3.88□□□□□ -1.79
HMGCS2P54868 AC022306.3-201ENST00000619930 550 ntBASIC3.88□□□□□ -1.79
HMGCS2P54868 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.88□□□□□ -1.79
HMGCS2P54868 AL138955.1-201ENST00000622881 1040 ntBASIC3.88□□□□□ -1.79
HMGCS2P54868 OR6C71P-202ENST00000641886 1107 ntBASIC3.88□□□□□ -1.79
HMGCS2P54868 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.88□□□□□ -1.79
HMGCS2P54868 AL365361.1-201ENST00000566942 3481 ntBASIC3.88□□□□□ -1.79
HMGCS2P54868 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
HMGCS2P54868 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HMGCS2P54868 CEP170P1-201ENST00000502249 4587 ntBASIC3.88□□□□□ -1.79
HMGCS2P54868 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HMGCS2P54868 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HMGCS2P54868 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.87□□□□□ -1.79
HMGCS2P54868 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HMGCS2P54868 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HMGCS2P54868 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HMGCS2P54868 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HMGCS2P54868 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.87□□□□□ -1.79
HMGCS2P54868 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.87□□□□□ -1.79
HMGCS2P54868 RNU6-283P-201ENST00000364788 107 ntBASIC3.87□□□□□ -1.79
HMGCS2P54868 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.87□□□□□ -1.79
HMGCS2P54868 RNU6-185P-201ENST00000384421 107 ntBASIC3.87□□□□□ -1.79
HMGCS2P54868 MIR708-201ENST00000390708 88 ntBASIC3.87□□□□□ -1.79
HMGCS2P54868 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HMGCS2P54868 LINC01347-201ENST00000417964 355 ntBASIC3.87□□□□□ -1.79
HMGCS2P54868 AC004552.1-201ENST00000419089 348 ntBASIC3.87□□□□□ -1.79
HMGCS2P54868 RPL30P3-201ENST00000424262 333 ntBASIC3.87□□□□□ -1.79
HMGCS2P54868 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HMGCS2P54868 NANOGP6-201ENST00000429190 847 ntBASIC3.87□□□□□ -1.79
HMGCS2P54868 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.87□□□□□ -1.79
HMGCS2P54868 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.87□□□□□ -1.79
HMGCS2P54868 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.87□□□□□ -1.79
HMGCS2P54868 RPL7P55-201ENST00000450522 746 ntBASIC3.87□□□□□ -1.79
HMGCS2P54868 RPL21P47-201ENST00000483696 477 ntBASIC3.87□□□□□ -1.79
HMGCS2P54868 AC090543.2-201ENST00000483963 348 ntBASIC3.87□□□□□ -1.79
HMGCS2P54868 AC011825.1-201ENST00000484967 388 ntBASIC3.87□□□□□ -1.79
HMGCS2P54868 OR5AP1P-201ENST00000529730 940 ntBASIC3.87□□□□□ -1.79
HMGCS2P54868 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.87□□□□□ -1.79
HMGCS2P54868 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.87□□□□□ -1.79
HMGCS2P54868 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.87□□□□□ -1.79
HMGCS2P54868 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.87□□□□□ -1.79
HMGCS2P54868 LARP7P3-201ENST00000579888 337 ntBASIC3.87□□□□□ -1.79
HMGCS2P54868 MIR548Y-201ENST00000582739 110 ntBASIC3.87□□□□□ -1.79
HMGCS2P54868 AC006116.7-201ENST00000590141 756 ntBASIC3.87□□□□□ -1.79
HMGCS2P54868 AC020914.4-201ENST00000597690 277 ntBASIC3.87□□□□□ -1.79
HMGCS2P54868 AC010680.3-201ENST00000604215 520 ntBASIC3.87□□□□□ -1.79
HMGCS2P54868 AC073657.2-201ENST00000605661 303 ntBASIC3.87□□□□□ -1.79
HMGCS2P54868 AL139022.2-201ENST00000606934 443 ntBASIC3.87□□□□□ -1.79
HMGCS2P54868 AC011374.2-201ENST00000607135 526 ntBASIC3.87□□□□□ -1.79
HMGCS2P54868 AC112503.2-201ENST00000609005 552 ntBASIC3.87□□□□□ -1.79
HMGCS2P54868 AC018645.2-201ENST00000609151 472 ntBASIC3.87□□□□□ -1.79
HMGCS2P54868 AC138932.5-201ENST00000617759 563 ntBASIC3.87□□□□□ -1.79
HMGCS2P54868 AC005858.4-201ENST00000623191 700 ntBASIC3.87□□□□□ -1.79
HMGCS2P54868 AP003072.4-201ENST00000624580 310 ntBASIC3.87□□□□□ -1.79
HMGCS2P54868 AL590396.2-201ENST00000636511 1041 ntBASIC3.87□□□□□ -1.79
HMGCS2P54868 AC009452.1-201ENST00000640823 606 ntBASIC3.87□□□□□ -1.79
HMGCS2P54868 AC090229.1-201ENST00000590983 1609 ntBASIC3.87□□□□□ -1.79
HMGCS2P54868 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.87□□□□□ -1.79
HMGCS2P54868 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
HMGCS2P54868 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
HMGCS2P54868 NCAPGP1-201ENST00000505112 1814 ntBASIC3.86□□□□□ -1.79
HMGCS2P54868 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms