Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.97□□□□□ -1.45
EPHA4P54764 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.97□□□□□ -1.45
EPHA4P54764 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.97□□□□□ -1.45
EPHA4P54764 AL389925.1-201ENST00000432257 728 ntBASIC5.97□□□□□ -1.45
EPHA4P54764 RPL7P28-201ENST00000437739 740 ntBASIC5.97□□□□□ -1.45
EPHA4P54764 AC127537.2-201ENST00000439258 465 ntBASIC5.97□□□□□ -1.45
EPHA4P54764 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.97□□□□□ -1.45
EPHA4P54764 GAPDHP23-201ENST00000444823 993 ntBASIC5.97□□□□□ -1.45
EPHA4P54764 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.97□□□□□ -1.45
EPHA4P54764 EEF1A1P1-201ENST00000447052 739 ntBASIC5.97□□□□□ -1.45
EPHA4P54764 SCARNA18-201ENST00000459004 134 ntBASIC5.97□□□□□ -1.45
EPHA4P54764 AC116533.1-201ENST00000459748 321 ntBASIC5.97□□□□□ -1.45
EPHA4P54764 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
EPHA4P54764 AC092865.4-201ENST00000477936 615 ntBASIC5.97□□□□□ -1.45
EPHA4P54764 FTH1P24-201ENST00000503502 462 ntBASIC5.97□□□□□ -1.45
EPHA4P54764 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.97□□□□□ -1.45
EPHA4P54764 AC108078.2-201ENST00000510750 236 ntBASIC5.97□□□□□ -1.45
EPHA4P54764 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.97□□□□□ -1.45
EPHA4P54764 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.97□□□□□ -1.45
EPHA4P54764 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.97□□□□□ -1.45
EPHA4P54764 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.97□□□□□ -1.45
EPHA4P54764 AC005341.1-201ENST00000571086 708 ntBASIC5.97□□□□□ -1.45
EPHA4P54764 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.97□□□□□ -1.45
EPHA4P54764 AC073539.2-201ENST00000597113 165 ntBASIC5.97□□□□□ -1.45
EPHA4P54764 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
EPHA4P54764 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.97□□□□□ -1.45
EPHA4P54764 AC008555.7-201ENST00000605008 583 ntBASIC5.97□□□□□ -1.45
EPHA4P54764 AL022394.1-201ENST00000606979 292 ntBASIC5.97□□□□□ -1.45
EPHA4P54764 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.97□□□□□ -1.45
EPHA4P54764 U2.17-201ENST00000611454 95 ntBASIC5.97□□□□□ -1.45
EPHA4P54764 AL138726.1-201ENST00000614873 333 ntBASIC5.97□□□□□ -1.45
EPHA4P54764 AL355365.1-201ENST00000616480 294 ntBASIC5.97□□□□□ -1.45
EPHA4P54764 AC007485.1-201ENST00000616755 206 ntBASIC5.97□□□□□ -1.45
EPHA4P54764 AL161637.1-201ENST00000622380 412 ntBASIC5.97□□□□□ -1.45
EPHA4P54764 AC073488.3-201ENST00000631611 778 ntBASIC5.97□□□□□ -1.45
EPHA4P54764 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
EPHA4P54764 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
EPHA4P54764 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
EPHA4P54764 AC103710.2-202ENST00000641454 2853 ntBASIC5.97□□□□□ -1.45
EPHA4P54764 ZNF33CP-201ENST00000432492 2030 ntBASIC5.97□□□□□ -1.45
EPHA4P54764 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
EPHA4P54764 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.97□□□□□ -1.45
EPHA4P54764 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
EPHA4P54764 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
EPHA4P54764 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
EPHA4P54764 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
EPHA4P54764 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
EPHA4P54764 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.97□□□□□ -1.45
EPHA4P54764 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
EPHA4P54764 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
EPHA4P54764 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
EPHA4P54764 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
EPHA4P54764 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.97□□□□□ -1.45
EPHA4P54764 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
EPHA4P54764 EXOC5P1-201ENST00000510543 1969 ntBASIC5.97□□□□□ -1.45
EPHA4P54764 AC008627.1-201ENST00000517511 1704 ntBASIC5.96□□□□□ -1.45
EPHA4P54764 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.45
EPHA4P54764 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.96□□□□□ -1.45
EPHA4P54764 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
EPHA4P54764 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.96□□□□□ -1.45
EPHA4P54764 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
EPHA4P54764 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.96□□□□□ -1.45
EPHA4P54764 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
EPHA4P54764 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
EPHA4P54764 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.96□□□□□ -1.46
EPHA4P54764 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
EPHA4P54764 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.96□□□□□ -1.46
EPHA4P54764 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.96□□□□□ -1.46
EPHA4P54764 RNU6-188P-201ENST00000364207 107 ntBASIC5.96□□□□□ -1.46
EPHA4P54764 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
EPHA4P54764 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
EPHA4P54764 Y_RNA.455-201ENST00000384230 98 ntBASIC5.96□□□□□ -1.46
EPHA4P54764 Y_RNA.574-201ENST00000384766 95 ntBASIC5.96□□□□□ -1.46
EPHA4P54764 RPL30P2-201ENST00000414021 291 ntBASIC5.96□□□□□ -1.46
EPHA4P54764 GJA6P-201ENST00000415117 1042 ntBASIC5.96□□□□□ -1.46
EPHA4P54764 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.96□□□□□ -1.46
EPHA4P54764 AC114491.1-201ENST00000416095 246 ntBASIC5.96□□□□□ -1.46
EPHA4P54764 Z93019.1-201ENST00000416450 973 ntBASIC5.96□□□□□ -1.46
EPHA4P54764 AC093151.1-201ENST00000427711 313 ntBASIC5.96□□□□□ -1.46
EPHA4P54764 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.96□□□□□ -1.46
EPHA4P54764 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.96□□□□□ -1.46
EPHA4P54764 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.96□□□□□ -1.46
EPHA4P54764 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC5.96□□□□□ -1.46
EPHA4P54764 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.96□□□□□ -1.46
EPHA4P54764 RPS17P13-201ENST00000448974 407 ntBASIC5.96□□□□□ -1.46
EPHA4P54764 AC092967.1-201ENST00000449016 481 ntBASIC5.96□□□□□ -1.46
EPHA4P54764 YWHAEP1-201ENST00000453697 763 ntBASIC5.96□□□□□ -1.46
EPHA4P54764 RPS27AP1-201ENST00000475545 471 ntBASIC5.96□□□□□ -1.46
EPHA4P54764 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.96□□□□□ -1.46
EPHA4P54764 RFPL4AP5-201ENST00000514977 504 ntBASIC5.96□□□□□ -1.46
EPHA4P54764 SCARNA18.1-201ENST00000516330 83 ntBASIC5.96□□□□□ -1.46
EPHA4P54764 Y_RNA.708-201ENST00000516950 96 ntBASIC5.96□□□□□ -1.46
EPHA4P54764 RNU1-54P-201ENST00000517181 120 ntBASIC5.96□□□□□ -1.46
EPHA4P54764 AC009812.2-201ENST00000517657 457 ntBASIC5.96□□□□□ -1.46
EPHA4P54764 IGLVIV-53-201ENST00000520107 367 ntBASIC5.96□□□□□ -1.46
EPHA4P54764 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.96□□□□□ -1.46
EPHA4P54764 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.96□□□□□ -1.46
EPHA4P54764 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.96□□□□□ -1.46
EPHA4P54764 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.96□□□□□ -1.46
EPHA4P54764 AC124068.1-201ENST00000563131 678 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms