Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 RNA5SP51-201ENST00000364750 119 ntBASIC3.02□□□□□ -1.93
GTF2A1P52655 DEFA7P-201ENST00000382676 285 ntBASIC3.02□□□□□ -1.93
GTF2A1P52655 SNORD3H-201ENST00000384486 214 ntBASIC3.02□□□□□ -1.93
GTF2A1P52655 BTBD10P2-201ENST00000404779 676 ntBASIC3.02□□□□□ -1.93
GTF2A1P52655 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.02□□□□□ -1.93
GTF2A1P52655 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.02□□□□□ -1.93
GTF2A1P52655 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
GTF2A1P52655 RPS12P18-201ENST00000442381 270 ntBASIC3.02□□□□□ -1.93
GTF2A1P52655 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.02□□□□□ -1.93
GTF2A1P52655 TPT1P13-201ENST00000449760 499 ntBASIC3.02□□□□□ -1.93
GTF2A1P52655 NECAP1P2-201ENST00000455668 727 ntBASIC3.02□□□□□ -1.93
GTF2A1P52655 LARP7P4-201ENST00000481075 878 ntBASIC3.02□□□□□ -1.93
GTF2A1P52655 HMGB1P3-201ENST00000502802 616 ntBASIC3.02□□□□□ -1.93
GTF2A1P52655 CDH12P2-201ENST00000504393 298 ntBASIC3.02□□□□□ -1.93
GTF2A1P52655 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.02□□□□□ -1.93
GTF2A1P52655 RN7SKP122-201ENST00000515923 296 ntBASIC3.02□□□□□ -1.93
GTF2A1P52655 RN7SKP141-201ENST00000516167 338 ntBASIC3.02□□□□□ -1.93
GTF2A1P52655 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.02□□□□□ -1.93
GTF2A1P52655 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC3.02□□□□□ -1.93
GTF2A1P52655 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.02□□□□□ -1.93
GTF2A1P52655 AC104785.1-201ENST00000603220 588 ntBASIC3.02□□□□□ -1.93
GTF2A1P52655 AL592494.3-201ENST00000609485 464 ntBASIC3.02□□□□□ -1.93
GTF2A1P52655 MIR6820-201ENST00000611508 62 ntBASIC3.02□□□□□ -1.93
GTF2A1P52655 AL020991.1-201ENST00000612314 373 ntBASIC3.02□□□□□ -1.93
GTF2A1P52655 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
GTF2A1P52655 SNORD39.4-201ENST00000620099 78 ntBASIC3.02□□□□□ -1.93
GTF2A1P52655 MIR6758-201ENST00000620653 63 ntBASIC3.02□□□□□ -1.93
GTF2A1P52655 AC022509.4-201ENST00000621404 572 ntBASIC3.02□□□□□ -1.93
GTF2A1P52655 FRG1DP-201ENST00000635586 771 ntBASIC3.02□□□□□ -1.93
GTF2A1P52655 HSPA8P19-201ENST00000505359 1517 ntBASIC3.02□□□□□ -1.93
GTF2A1P52655 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
GTF2A1P52655 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.02□□□□□ -1.93
GTF2A1P52655 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.01□□□□□ -1.93
GTF2A1P52655 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.01□□□□□ -1.93
GTF2A1P52655 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
GTF2A1P52655 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
GTF2A1P52655 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.01□□□□□ -1.93
GTF2A1P52655 AC241520.1-201ENST00000422654 1099 ntBASIC3.01□□□□□ -1.93
GTF2A1P52655 EIF2S2P3-201ENST00000428356 999 ntBASIC3.01□□□□□ -1.93
GTF2A1P52655 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.01□□□□□ -1.93
GTF2A1P52655 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
GTF2A1P52655 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.01□□□□□ -1.93
GTF2A1P52655 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.01□□□□□ -1.93
GTF2A1P52655 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.01□□□□□ -1.93
GTF2A1P52655 OR6C73P-201ENST00000546432 358 ntBASIC3.01□□□□□ -1.93
GTF2A1P52655 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.01□□□□□ -1.93
GTF2A1P52655 RN7SL703P-201ENST00000578485 302 ntBASIC3.01□□□□□ -1.93
GTF2A1P52655 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
GTF2A1P52655 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.01□□□□□ -1.93
GTF2A1P52655 AC139769.3-201ENST00000618383 175 ntBASIC3.01□□□□□ -1.93
GTF2A1P52655 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.01□□□□□ -1.93
GTF2A1P52655 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC3.01□□□□□ -1.93
GTF2A1P52655 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC3.01□□□□□ -1.93
GTF2A1P52655 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
GTF2A1P52655 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
GTF2A1P52655 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.01□□□□□ -1.93
GTF2A1P52655 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
GTF2A1P52655 AC138915.1-201ENST00000565427 1685 ntBASIC3.01□□□□□ -1.93
GTF2A1P52655 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.01□□□□□ -1.93
GTF2A1P52655 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
GTF2A1P52655 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3□□□□□ -1.93
GTF2A1P52655 RPL32P3-201ENST00000359025 275 ntBASIC3□□□□□ -1.93
GTF2A1P52655 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3□□□□□ -1.93
GTF2A1P52655 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3□□□□□ -1.93
GTF2A1P52655 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3□□□□□ -1.93
GTF2A1P52655 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3□□□□□ -1.93
GTF2A1P52655 SUMO1P4-201ENST00000429430 302 ntBASIC3□□□□□ -1.93
GTF2A1P52655 AL592437.1-201ENST00000443781 492 ntBASIC3□□□□□ -1.93
GTF2A1P52655 HSFY6P-201ENST00000445573 403 ntBASIC3□□□□□ -1.93
GTF2A1P52655 AL109741.2-201ENST00000455561 343 ntBASIC3□□□□□ -1.93
GTF2A1P52655 AC073901.1-201ENST00000462471 408 ntBASIC3□□□□□ -1.93
GTF2A1P52655 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3□□□□□ -1.93
GTF2A1P52655 ACTR3P3-201ENST00000480448 893 ntBASIC3□□□□□ -1.93
GTF2A1P52655 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3□□□□□ -1.93
GTF2A1P52655 RPL7L1P13-201ENST00000511702 739 ntBASIC3□□□□□ -1.93
GTF2A1P52655 RNA5SP367-201ENST00000516557 118 ntBASIC3□□□□□ -1.93
GTF2A1P52655 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3□□□□□ -1.93
GTF2A1P52655 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3□□□□□ -1.93
GTF2A1P52655 AGGF1P6-201ENST00000569213 976 ntBASIC3□□□□□ -1.93
GTF2A1P52655 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3□□□□□ -1.93
GTF2A1P52655 RPL23AP78-201ENST00000599928 470 ntBASIC3□□□□□ -1.93
GTF2A1P52655 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3□□□□□ -1.93
GTF2A1P52655 AC099676.1-201ENST00000608886 657 ntBASIC3□□□□□ -1.93
GTF2A1P52655 uc_338.1-201ENST00000612113 180 ntBASIC3□□□□□ -1.93
GTF2A1P52655 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3□□□□□ -1.93
GTF2A1P52655 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.99□□□□□ -1.93
GTF2A1P52655 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.99□□□□□ -1.93
GTF2A1P52655 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.99□□□□□ -1.93
GTF2A1P52655 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
GTF2A1P52655 U8.11-201ENST00000384699 133 ntBASIC2.99□□□□□ -1.93
GTF2A1P52655 U8.12-201ENST00000384701 133 ntBASIC2.99□□□□□ -1.93
GTF2A1P52655 AC007066.1-201ENST00000392902 381 ntBASIC2.99□□□□□ -1.93
GTF2A1P52655 RSL24D1P1-201ENST00000404972 493 ntBASIC2.99□□□□□ -1.93
GTF2A1P52655 RNA5SP274-201ENST00000410484 108 ntBASIC2.99□□□□□ -1.93
GTF2A1P52655 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.99□□□□□ -1.93
GTF2A1P52655 CR769767.1-201ENST00000436337 346 ntBASIC2.99□□□□□ -1.93
GTF2A1P52655 RPS29P7-201ENST00000439662 171 ntBASIC2.99□□□□□ -1.93
GTF2A1P52655 RRM2P4-201ENST00000441721 562 ntBASIC2.99□□□□□ -1.93
GTF2A1P52655 U8.18-201ENST00000459285 133 ntBASIC2.99□□□□□ -1.93
GTF2A1P52655 RPL37P6-202ENST00000464216 403 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 7.2 ms