Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 AC048347.1-201ENST00000624621 427 ntBASIC2.7□□□□□ -1.98
POLR2JP52435 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.7□□□□□ -1.98
POLR2JP52435 AC118273.1-201ENST00000525324 3006 ntBASIC2.7□□□□□ -1.98
POLR2JP52435 AC026951.1-201ENST00000559530 2459 ntBASIC2.69□□□□□ -1.98
POLR2JP52435 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
POLR2JP52435 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
POLR2JP52435 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
POLR2JP52435 MIR26A1-201ENST00000362205 77 ntBASIC2.69□□□□□ -1.98
POLR2JP52435 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.69□□□□□ -1.98
POLR2JP52435 MIR591-201ENST00000385290 95 ntBASIC2.69□□□□□ -1.98
POLR2JP52435 HMGB1P13-201ENST00000406019 642 ntBASIC2.69□□□□□ -1.98
POLR2JP52435 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.69□□□□□ -1.98
POLR2JP52435 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC2.69□□□□□ -1.98
POLR2JP52435 MTCO1P52-201ENST00000433928 531 ntBASIC2.69□□□□□ -1.98
POLR2JP52435 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.69□□□□□ -1.98
POLR2JP52435 AL513043.1-201ENST00000439124 535 ntBASIC2.69□□□□□ -1.98
POLR2JP52435 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC2.69□□□□□ -1.98
POLR2JP52435 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
POLR2JP52435 RPL29P29-201ENST00000448725 423 ntBASIC2.69□□□□□ -1.98
POLR2JP52435 AL354710.1-201ENST00000453641 246 ntBASIC2.69□□□□□ -1.98
POLR2JP52435 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.69□□□□□ -1.98
POLR2JP52435 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC2.69□□□□□ -1.98
POLR2JP52435 RPL7P5-201ENST00000471472 736 ntBASIC2.69□□□□□ -1.98
POLR2JP52435 RPL32P34-201ENST00000486380 400 ntBASIC2.69□□□□□ -1.98
POLR2JP52435 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
POLR2JP52435 AC007536.1-201ENST00000533382 349 ntBASIC2.69□□□□□ -1.98
POLR2JP52435 AL020997.2-201ENST00000602607 184 ntBASIC2.69□□□□□ -1.98
POLR2JP52435 AC019176.2-201ENST00000611579 315 ntBASIC2.69□□□□□ -1.98
POLR2JP52435 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.69□□□□□ -1.98
POLR2JP52435 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.69□□□□□ -1.98
POLR2JP52435 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
POLR2JP52435 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
POLR2JP52435 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
POLR2JP52435 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
POLR2JP52435 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.69□□□□□ -1.98
POLR2JP52435 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.69□□□□□ -1.98
POLR2JP52435 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
POLR2JP52435 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.69□□□□□ -1.98
POLR2JP52435 AC096644.4-201ENST00000563417 2912 ntBASIC2.69□□□□□ -1.98
POLR2JP52435 AP003122.5-201ENST00000527668 3766 ntBASIC2.69□□□□□ -1.98
POLR2JP52435 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.68□□□□□ -1.98
POLR2JP52435 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.68□□□□□ -1.98
POLR2JP52435 RNU6-851P-201ENST00000384565 107 ntBASIC2.68□□□□□ -1.98
POLR2JP52435 AL355379.1-201ENST00000405542 640 ntBASIC2.68□□□□□ -1.98
POLR2JP52435 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC2.68□□□□□ -1.98
POLR2JP52435 AL158156.1-201ENST00000422509 473 ntBASIC2.68□□□□□ -1.98
POLR2JP52435 AL050321.1-201ENST00000432363 400 ntBASIC2.68□□□□□ -1.98
POLR2JP52435 AC093156.1-201ENST00000440382 670 ntBASIC2.68□□□□□ -1.98
POLR2JP52435 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC2.68□□□□□ -1.98
POLR2JP52435 NIPA2P5-201ENST00000452282 464 ntBASIC2.68□□□□□ -1.98
POLR2JP52435 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC2.68□□□□□ -1.98
POLR2JP52435 RN7SL499P-201ENST00000481141 276 ntBASIC2.68□□□□□ -1.98
POLR2JP52435 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.68□□□□□ -1.98
POLR2JP52435 SCGB1D5P-201ENST00000515134 247 ntBASIC2.68□□□□□ -1.98
POLR2JP52435 Vault.1-201ENST00000516474 102 ntBASIC2.68□□□□□ -1.98
POLR2JP52435 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
POLR2JP52435 CCNG2P1-201ENST00000549521 1000 ntBASIC2.68□□□□□ -1.98
POLR2JP52435 AL355836.1-201ENST00000555951 870 ntBASIC2.68□□□□□ -1.98
POLR2JP52435 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.68□□□□□ -1.98
POLR2JP52435 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.68□□□□□ -1.98
POLR2JP52435 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.68□□□□□ -1.98
POLR2JP52435 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC2.68□□□□□ -1.98
POLR2JP52435 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
POLR2JP52435 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC2.68□□□□□ -1.98
POLR2JP52435 ZNF861P-201ENST00000588126 639 ntBASIC2.68□□□□□ -1.98
POLR2JP52435 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.68□□□□□ -1.98
POLR2JP52435 AC006111.3-201ENST00000622137 383 ntBASIC2.68□□□□□ -1.98
POLR2JP52435 AL161637.1-201ENST00000622380 412 ntBASIC2.68□□□□□ -1.98
POLR2JP52435 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
POLR2JP52435 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.68□□□□□ -1.98
POLR2JP52435 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.68□□□□□ -1.98
POLR2JP52435 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
POLR2JP52435 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
POLR2JP52435 AL139811.1-201ENST00000424779 2299 ntBASIC2.67□□□□□ -1.98
POLR2JP52435 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC2.67□□□□□ -1.98
POLR2JP52435 RNA5SP167-201ENST00000365461 116 ntBASIC2.67□□□□□ -1.98
POLR2JP52435 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.67□□□□□ -1.98
POLR2JP52435 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.67□□□□□ -1.98
POLR2JP52435 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC2.67□□□□□ -1.98
POLR2JP52435 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.67□□□□□ -1.98
POLR2JP52435 COX6CP2-201ENST00000444980 225 ntBASIC2.67□□□□□ -1.98
POLR2JP52435 RPL39P40-201ENST00000445481 146 ntBASIC2.67□□□□□ -1.98
POLR2JP52435 MRPL50P4-201ENST00000446432 475 ntBASIC2.67□□□□□ -1.98
POLR2JP52435 RPL36AP33-201ENST00000450395 310 ntBASIC2.67□□□□□ -1.98
POLR2JP52435 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.67□□□□□ -1.98
POLR2JP52435 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.67□□□□□ -1.98
POLR2JP52435 AC089999.1-201ENST00000460336 374 ntBASIC2.67□□□□□ -1.98
POLR2JP52435 AC091179.1-201ENST00000461606 579 ntBASIC2.67□□□□□ -1.98
POLR2JP52435 FAM133DP-201ENST00000464802 691 ntBASIC2.67□□□□□ -1.98
POLR2JP52435 SNORA67.7-201ENST00000516664 135 ntBASIC2.67□□□□□ -1.98
POLR2JP52435 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC2.67□□□□□ -1.98
POLR2JP52435 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.67□□□□□ -1.98
POLR2JP52435 AC010198.2-201ENST00000550612 259 ntBASIC2.67□□□□□ -1.98
POLR2JP52435 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.67□□□□□ -1.98
POLR2JP52435 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.67□□□□□ -1.98
POLR2JP52435 AL109618.2-201ENST00000605527 211 ntBASIC2.67□□□□□ -1.98
POLR2JP52435 AC124312.4-201ENST00000605533 310 ntBASIC2.67□□□□□ -1.98
POLR2JP52435 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.67□□□□□ -1.98
POLR2JP52435 AC006133.1-201ENST00000617106 264 ntBASIC2.67□□□□□ -1.98
POLR2JP52435 AL731566.2-201ENST00000618971 317 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms