Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.33□□□□□ -1.72
CLCN3P51790 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLCN3P51790 RNU1-85P-201ENST00000364127 164 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 RNA5SP97-201ENST00000365006 84 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.33□□□□□ -1.72
CLCN3P51790 MTCO3P31-201ENST00000405526 789 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 MIR1251-201ENST00000408552 70 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.33□□□□□ -1.72
CLCN3P51790 RPL7AP73-201ENST00000413490 353 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.33□□□□□ -1.72
CLCN3P51790 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.33□□□□□ -1.72
CLCN3P51790 MRPS36P1-201ENST00000421291 307 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 AC009237.2-201ENST00000421358 284 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 AC010099.3-201ENST00000423896 409 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 RPL7P44-201ENST00000424827 742 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 UBE2V1P1-201ENST00000430836 445 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 SEPT7P5-201ENST00000434048 306 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.33□□□□□ -1.72
CLCN3P51790 AC241584.1-201ENST00000438469 1241 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 MTND6P18-201ENST00000439477 513 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 RANP8-201ENST00000444720 713 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 MTCO2P25-201ENST00000447065 681 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 PTENP1-201ENST00000447117 1215 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 IFNWP4-201ENST00000453148 294 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 RFC5P1-201ENST00000454419 874 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 AC108734.3-201ENST00000481241 1165 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 KLRA1P-201ENST00000503499 986 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 AC011352.3-201ENST00000505162 593 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 AC017037.1-201ENST00000508460 471 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.33□□□□□ -1.72
CLCN3P51790 IGKV2-38-201ENST00000517443 247 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLCN3P51790 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.33□□□□□ -1.72
CLCN3P51790 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.33□□□□□ -1.72
CLCN3P51790 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CLCN3P51790 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.33□□□□□ -1.72
CLCN3P51790 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.33□□□□□ -1.72
CLCN3P51790 AC135279.1-201ENST00000543493 504 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 CYCSP30-201ENST00000546447 172 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.33□□□□□ -1.72
CLCN3P51790 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.33□□□□□ -1.72
CLCN3P51790 VN1R78P-201ENST00000597393 564 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 BNIP3P26-201ENST00000600827 554 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 AC112230.1-201ENST00000604342 547 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 AL451064.1-201ENST00000607718 471 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.33□□□□□ -1.72
CLCN3P51790 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.33□□□□□ -1.72
CLCN3P51790 AL773545.4-201ENST00000637262 310 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 AC068137.4-201ENST00000638485 296 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 OR8B1P-202ENST00000641132 1178 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 AL513478.4-201ENST00000641636 310 ntBASIC4.33□□□□□ -1.72
CLCN3P51790 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CLCN3P51790 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLCN3P51790 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
CLCN3P51790 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CLCN3P51790 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLCN3P51790 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLCN3P51790 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.33□□□□□ -1.72
CLCN3P51790 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLCN3P51790 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.32□□□□□ -1.72
CLCN3P51790 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CLCN3P51790 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
CLCN3P51790 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLCN3P51790 DCAF13P3-201ENST00000561147 1334 ntBASIC4.32□□□□□ -1.72
CLCN3P51790 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.32□□□□□ -1.72
CLCN3P51790 RNU6-1293P-201ENST00000384077 107 ntBASIC4.32□□□□□ -1.72
CLCN3P51790 SNORD116-8-201ENST00000384365 95 ntBASIC4.32□□□□□ -1.72
CLCN3P51790 MIR670-201ENST00000390142 98 ntBASIC4.32□□□□□ -1.72
CLCN3P51790 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.32□□□□□ -1.72
CLCN3P51790 DSTNP4-201ENST00000399472 474 ntBASIC4.32□□□□□ -1.72
CLCN3P51790 AL121834.1-202ENST00000404494 277 ntBASIC4.32□□□□□ -1.72
CLCN3P51790 AL133264.1-201ENST00000407157 562 ntBASIC4.32□□□□□ -1.72
CLCN3P51790 AL160275.2-201ENST00000412010 394 ntBASIC4.32□□□□□ -1.72
CLCN3P51790 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.32□□□□□ -1.72
CLCN3P51790 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.32□□□□□ -1.72
CLCN3P51790 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLCN3P51790 OR4F13P-201ENST00000428478 931 ntBASIC4.32□□□□□ -1.72
CLCN3P51790 GOT2P5-201ENST00000433995 546 ntBASIC4.32□□□□□ -1.72
CLCN3P51790 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.32□□□□□ -1.72
CLCN3P51790 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.32□□□□□ -1.72
CLCN3P51790 NOTCH2P1-201ENST00000443481 624 ntBASIC4.32□□□□□ -1.72
CLCN3P51790 AL133547.1-201ENST00000448546 220 ntBASIC4.32□□□□□ -1.72
CLCN3P51790 COX6CP18-201ENST00000448769 222 ntBASIC4.32□□□□□ -1.72
CLCN3P51790 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.32□□□□□ -1.72
CLCN3P51790 APOOP2-201ENST00000461561 539 ntBASIC4.32□□□□□ -1.72
CLCN3P51790 RN7SL271P-201ENST00000487601 295 ntBASIC4.32□□□□□ -1.72
CLCN3P51790 AC082651.2-201ENST00000496833 166 ntBASIC4.32□□□□□ -1.72
CLCN3P51790 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.32□□□□□ -1.72
CLCN3P51790 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.32□□□□□ -1.72
CLCN3P51790 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLCN3P51790 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.32□□□□□ -1.72
CLCN3P51790 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.32□□□□□ -1.72
CLCN3P51790 HNRNPCP4-201ENST00000571636 900 ntBASIC4.32□□□□□ -1.72
CLCN3P51790 MTND6P33-201ENST00000571794 183 ntBASIC4.32□□□□□ -1.72
CLCN3P51790 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.32□□□□□ -1.72
CLCN3P51790 AC061975.8-201ENST00000587058 721 ntBASIC4.32□□□□□ -1.72
CLCN3P51790 MRPS35P3-201ENST00000603189 709 ntBASIC4.32□□□□□ -1.72
CLCN3P51790 RNU6-156P-201ENST00000621869 107 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms