Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 IFNNP1-201ENST00000429219 553 ntBASIC4.02□□□□□ -1.77
LHX1P48742 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.02□□□□□ -1.77
LHX1P48742 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.02□□□□□ -1.77
LHX1P48742 SNORA71B-202ENST00000439232 272 ntBASIC4.02□□□□□ -1.77
LHX1P48742 COX6CP18-201ENST00000448769 222 ntBASIC4.02□□□□□ -1.77
LHX1P48742 AC006480.1-201ENST00000449887 378 ntBASIC4.02□□□□□ -1.77
LHX1P48742 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
LHX1P48742 AC079776.3-201ENST00000450665 370 ntBASIC4.02□□□□□ -1.77
LHX1P48742 ZNF886P-201ENST00000450781 723 ntBASIC4.02□□□□□ -1.77
LHX1P48742 AC098824.1-201ENST00000453565 980 ntBASIC4.02□□□□□ -1.77
LHX1P48742 PTGES3P5-201ENST00000455109 434 ntBASIC4.02□□□□□ -1.77
LHX1P48742 AC087879.1-201ENST00000474343 374 ntBASIC4.02□□□□□ -1.77
LHX1P48742 AP000893.1-201ENST00000474462 794 ntBASIC4.02□□□□□ -1.77
LHX1P48742 RPL23AP44-201ENST00000482216 473 ntBASIC4.02□□□□□ -1.77
LHX1P48742 RPL21P129-201ENST00000491732 478 ntBASIC4.02□□□□□ -1.77
LHX1P48742 AP002812.1-201ENST00000495378 474 ntBASIC4.02□□□□□ -1.77
LHX1P48742 UBE2CP3-201ENST00000502715 450 ntBASIC4.02□□□□□ -1.77
LHX1P48742 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.02□□□□□ -1.77
LHX1P48742 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.02□□□□□ -1.77
LHX1P48742 AC113347.3-201ENST00000509113 148 ntBASIC4.02□□□□□ -1.77
LHX1P48742 RAC1P2-201ENST00000511164 579 ntBASIC4.02□□□□□ -1.77
LHX1P48742 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.02□□□□□ -1.77
LHX1P48742 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.02□□□□□ -1.77
LHX1P48742 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.02□□□□□ -1.77
LHX1P48742 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.02□□□□□ -1.77
LHX1P48742 MTND2P32-201ENST00000521584 1038 ntBASIC4.02□□□□□ -1.77
LHX1P48742 AC090819.1-201ENST00000523800 1111 ntBASIC4.02□□□□□ -1.77
LHX1P48742 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.02□□□□□ -1.77
LHX1P48742 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.02□□□□□ -1.77
LHX1P48742 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.02□□□□□ -1.77
LHX1P48742 MTCYBP28-201ENST00000566728 1132 ntBASIC4.02□□□□□ -1.77
LHX1P48742 AC074051.3-201ENST00000570238 358 ntBASIC4.02□□□□□ -1.77
LHX1P48742 MIR3912-201ENST00000577566 105 ntBASIC4.02□□□□□ -1.77
LHX1P48742 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.02□□□□□ -1.77
LHX1P48742 MIR3158-1-201ENST00000583596 81 ntBASIC4.02□□□□□ -1.77
LHX1P48742 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.02□□□□□ -1.77
LHX1P48742 HSPE1P14-201ENST00000605812 302 ntBASIC4.02□□□□□ -1.77
LHX1P48742 AC106052.1-201ENST00000608029 497 ntBASIC4.02□□□□□ -1.77
LHX1P48742 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LHX1P48742 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.02□□□□□ -1.77
LHX1P48742 AC039056.2-201ENST00000622261 511 ntBASIC4.02□□□□□ -1.77
LHX1P48742 AL078595.3-201ENST00000623815 1166 ntBASIC4.02□□□□□ -1.77
LHX1P48742 FAM157B-203ENST00000639350 358 ntBASIC4.02□□□□□ -1.77
LHX1P48742 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
LHX1P48742 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LHX1P48742 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.02□□□□□ -1.77
LHX1P48742 AP005901.5-201ENST00000545779 1796 ntBASIC4.02□□□□□ -1.77
LHX1P48742 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LHX1P48742 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.01□□□□□ -1.77
LHX1P48742 AC025125.1-201ENST00000624743 1922 ntBASIC4.01□□□□□ -1.77
LHX1P48742 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LHX1P48742 AL122126.1-201ENST00000546905 1318 ntBASIC4.01□□□□□ -1.77
LHX1P48742 AC011978.2-201ENST00000569835 2054 ntBASIC4.01□□□□□ -1.77
LHX1P48742 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.01□□□□□ -1.77
LHX1P48742 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
LHX1P48742 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LHX1P48742 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
LHX1P48742 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LHX1P48742 snoZ40.1-201ENST00000364540 72 ntBASIC4.01□□□□□ -1.77
LHX1P48742 SNORA48.7-201ENST00000391302 135 ntBASIC4.01□□□□□ -1.77
LHX1P48742 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
LHX1P48742 AL121978.1-201ENST00000402778 359 ntBASIC4.01□□□□□ -1.77
LHX1P48742 AL136310.1-201ENST00000404926 654 ntBASIC4.01□□□□□ -1.77
LHX1P48742 ZNF603P-201ENST00000405613 487 ntBASIC4.01□□□□□ -1.77
LHX1P48742 AL603766.1-201ENST00000407763 664 ntBASIC4.01□□□□□ -1.77
LHX1P48742 RNU4-22P-201ENST00000411058 166 ntBASIC4.01□□□□□ -1.77
LHX1P48742 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.01□□□□□ -1.77
LHX1P48742 RAC1P3-201ENST00000416129 580 ntBASIC4.01□□□□□ -1.77
LHX1P48742 MOB1AP1-201ENST00000430903 535 ntBASIC4.01□□□□□ -1.77
LHX1P48742 AL353748.1-201ENST00000440753 474 ntBASIC4.01□□□□□ -1.77
LHX1P48742 EEF1A1P39-201ENST00000440791 250 ntBASIC4.01□□□□□ -1.77
LHX1P48742 AL589880.1-201ENST00000448271 287 ntBASIC4.01□□□□□ -1.77
LHX1P48742 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.01□□□□□ -1.77
LHX1P48742 UBDP1-202ENST00000457888 382 ntBASIC4.01□□□□□ -1.77
LHX1P48742 AC084024.2-201ENST00000503480 791 ntBASIC4.01□□□□□ -1.77
LHX1P48742 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.01□□□□□ -1.77
LHX1P48742 HMGN1P11-201ENST00000508668 303 ntBASIC4.01□□□□□ -1.77
LHX1P48742 AC018797.3-201ENST00000513388 1241 ntBASIC4.01□□□□□ -1.77
LHX1P48742 HNRNPKP5-201ENST00000515300 253 ntBASIC4.01□□□□□ -1.77
LHX1P48742 SNORA67.7-201ENST00000516664 135 ntBASIC4.01□□□□□ -1.77
LHX1P48742 SUMO2P20-201ENST00000520803 283 ntBASIC4.01□□□□□ -1.77
LHX1P48742 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.01□□□□□ -1.77
LHX1P48742 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.01□□□□□ -1.77
LHX1P48742 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.01□□□□□ -1.77
LHX1P48742 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.01□□□□□ -1.77
LHX1P48742 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.01□□□□□ -1.77
LHX1P48742 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LHX1P48742 AC093519.1-201ENST00000566109 298 ntBASIC4.01□□□□□ -1.77
LHX1P48742 RNU1-30P-201ENST00000606575 163 ntBASIC4.01□□□□□ -1.77
LHX1P48742 AC006133.1-201ENST00000617106 264 ntBASIC4.01□□□□□ -1.77
LHX1P48742 AL158163.2-201ENST00000619110 700 ntBASIC4.01□□□□□ -1.77
LHX1P48742 AL512506.2-201ENST00000624472 458 ntBASIC4.01□□□□□ -1.77
LHX1P48742 MIR6715B-201ENST00000637172 77 ntBASIC4.01□□□□□ -1.77
LHX1P48742 LINC02211-204ENST00000642024 1070 ntBASIC4.01□□□□□ -1.77
LHX1P48742 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LHX1P48742 MTND5P31-201ENST00000419366 1374 ntBASIC4.01□□□□□ -1.77
LHX1P48742 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
LHX1P48742 BDP1P-201ENST00000582658 1990 ntBASIC4□□□□□ -1.77
LHX1P48742 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
LHX1P48742 Z99496.1-201ENST00000469424 1477 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms