Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MIR5187-201ENST00000583479 76 ntBASIC3.78□□□□□ -1.8
SSR1P43307 AC022916.3-201ENST00000592961 742 ntBASIC3.78□□□□□ -1.8
SSR1P43307 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.78□□□□□ -1.8
SSR1P43307 AC135178.6-201ENST00000605314 398 ntBASIC3.78□□□□□ -1.8
SSR1P43307 AC011374.2-201ENST00000607135 526 ntBASIC3.78□□□□□ -1.8
SSR1P43307 AC099676.1-201ENST00000608886 657 ntBASIC3.78□□□□□ -1.8
SSR1P43307 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.78□□□□□ -1.8
SSR1P43307 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.78□□□□□ -1.8
SSR1P43307 AC090617.7-201ENST00000623952 126 ntBASIC3.78□□□□□ -1.8
SSR1P43307 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.78□□□□□ -1.8
SSR1P43307 AL513302.2-201ENST00000562313 1842 ntBASIC3.78□□□□□ -1.8
SSR1P43307 AC092435.3-201ENST00000565538 3654 ntBASIC3.77□□□□□ -1.81
SSR1P43307 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SSR1P43307 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
SSR1P43307 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SSR1P43307 AP001350.1-201ENST00000601906 1524 ntBASIC3.77□□□□□ -1.81
SSR1P43307 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SSR1P43307 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
SSR1P43307 SNORD3H-201ENST00000384486 214 ntBASIC3.77□□□□□ -1.81
SSR1P43307 AL136116.1-201ENST00000403591 381 ntBASIC3.77□□□□□ -1.81
SSR1P43307 ATF1P1-201ENST00000406040 927 ntBASIC3.77□□□□□ -1.81
SSR1P43307 RN7SKP123-201ENST00000410732 291 ntBASIC3.77□□□□□ -1.81
SSR1P43307 MTND4P22-201ENST00000413116 1169 ntBASIC3.77□□□□□ -1.81
SSR1P43307 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.77□□□□□ -1.81
SSR1P43307 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SSR1P43307 RPL37P1-201ENST00000432310 284 ntBASIC3.77□□□□□ -1.81
SSR1P43307 YWHAZP8-201ENST00000436935 731 ntBASIC3.77□□□□□ -1.81
SSR1P43307 MTND5P8-201ENST00000449817 1083 ntBASIC3.77□□□□□ -1.81
SSR1P43307 AC103987.1-201ENST00000473394 348 ntBASIC3.77□□□□□ -1.81
SSR1P43307 AC093663.2-201ENST00000484625 313 ntBASIC3.77□□□□□ -1.81
SSR1P43307 RN7SL283P-201ENST00000489055 303 ntBASIC3.77□□□□□ -1.81
SSR1P43307 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.77□□□□□ -1.81
SSR1P43307 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.77□□□□□ -1.81
SSR1P43307 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.77□□□□□ -1.81
SSR1P43307 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.77□□□□□ -1.81
SSR1P43307 MTND4LP31-201ENST00000514859 294 ntBASIC3.77□□□□□ -1.81
SSR1P43307 RNU6-1073P-201ENST00000517182 106 ntBASIC3.77□□□□□ -1.81
SSR1P43307 AP001207.1-201ENST00000524051 481 ntBASIC3.77□□□□□ -1.81
SSR1P43307 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.77□□□□□ -1.81
SSR1P43307 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.77□□□□□ -1.81
SSR1P43307 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.77□□□□□ -1.81
SSR1P43307 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.77□□□□□ -1.81
SSR1P43307 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.77□□□□□ -1.81
SSR1P43307 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.77□□□□□ -1.81
SSR1P43307 AC012254.4-201ENST00000588843 273 ntBASIC3.77□□□□□ -1.81
SSR1P43307 AC005229.3-201ENST00000603438 323 ntBASIC3.77□□□□□ -1.81
SSR1P43307 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.77□□□□□ -1.81
SSR1P43307 AC231759.1-201ENST00000616455 597 ntBASIC3.77□□□□□ -1.81
SSR1P43307 MIR6864-201ENST00000617935 70 ntBASIC3.77□□□□□ -1.81
SSR1P43307 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.77□□□□□ -1.81
SSR1P43307 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SSR1P43307 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.77□□□□□ -1.81
SSR1P43307 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SSR1P43307 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
SSR1P43307 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.77□□□□□ -1.81
SSR1P43307 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.76□□□□□ -1.81
SSR1P43307 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SSR1P43307 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
SSR1P43307 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
SSR1P43307 RNU6-543P-201ENST00000362576 108 ntBASIC3.76□□□□□ -1.81
SSR1P43307 RNA5SP42-201ENST00000364278 115 ntBASIC3.76□□□□□ -1.81
SSR1P43307 RNU6-796P-201ENST00000391086 107 ntBASIC3.76□□□□□ -1.81
SSR1P43307 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
SSR1P43307 RNU2-17P-201ENST00000410290 190 ntBASIC3.76□□□□□ -1.81
SSR1P43307 RNU2-21P-201ENST00000410368 188 ntBASIC3.76□□□□□ -1.81
SSR1P43307 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.76□□□□□ -1.81
SSR1P43307 GLRXP1-201ENST00000423261 334 ntBASIC3.76□□□□□ -1.81
SSR1P43307 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.76□□□□□ -1.81
SSR1P43307 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.76□□□□□ -1.81
SSR1P43307 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.76□□□□□ -1.81
SSR1P43307 AL158071.1-201ENST00000430315 461 ntBASIC3.76□□□□□ -1.81
SSR1P43307 AC091390.1-201ENST00000433904 331 ntBASIC3.76□□□□□ -1.81
SSR1P43307 AC074367.1-201ENST00000438685 1125 ntBASIC3.76□□□□□ -1.81
SSR1P43307 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.76□□□□□ -1.81
SSR1P43307 MTCO3P43-201ENST00000440974 771 ntBASIC3.76□□□□□ -1.81
SSR1P43307 RPS26P30-201ENST00000443431 335 ntBASIC3.76□□□□□ -1.81
SSR1P43307 RPL36AP33-201ENST00000450395 310 ntBASIC3.76□□□□□ -1.81
SSR1P43307 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.76□□□□□ -1.81
SSR1P43307 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.76□□□□□ -1.81
SSR1P43307 AC087312.1-201ENST00000471411 480 ntBASIC3.76□□□□□ -1.81
SSR1P43307 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.76□□□□□ -1.81
SSR1P43307 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.76□□□□□ -1.81
SSR1P43307 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SSR1P43307 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.76□□□□□ -1.81
SSR1P43307 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.76□□□□□ -1.81
SSR1P43307 RNU1-61P-201ENST00000516107 151 ntBASIC3.76□□□□□ -1.81
SSR1P43307 RNU2-27P-201ENST00000516185 142 ntBASIC3.76□□□□□ -1.81
SSR1P43307 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.76□□□□□ -1.81
SSR1P43307 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.76□□□□□ -1.81
SSR1P43307 MTND2P26-201ENST00000528255 1029 ntBASIC3.76□□□□□ -1.81
SSR1P43307 AC007536.1-201ENST00000533382 349 ntBASIC3.76□□□□□ -1.81
SSR1P43307 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.76□□□□□ -1.81
SSR1P43307 MIR4697-201ENST00000582977 78 ntBASIC3.76□□□□□ -1.81
SSR1P43307 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.76□□□□□ -1.81
SSR1P43307 BNIP3P38-201ENST00000601117 544 ntBASIC3.76□□□□□ -1.81
SSR1P43307 VN1R85P-201ENST00000601587 426 ntBASIC3.76□□□□□ -1.81
SSR1P43307 AL391497.1-201ENST00000608671 547 ntBASIC3.76□□□□□ -1.81
SSR1P43307 MIR6810-201ENST00000622701 70 ntBASIC3.76□□□□□ -1.81
SSR1P43307 AL118508.4-201ENST00000624142 1176 ntBASIC3.76□□□□□ -1.81
SSR1P43307 AL392088.2-201ENST00000637607 285 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms